Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047645 PREDICTED: putative chromatin-remodeling complex ATPase chain [Vitis vinifera] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10990 LG-11 + View
Acer truncatum Atru.chr4.2776 chr4 + View
Actinidia chinensis Actinidia40235 Lachesis_group22 + View
Actinidia chinensis Actinidia01938 Lachesis_group3 + View
Arabidopsis lyrata AL6G29890 scaffold_6 - View
Avicennia marina MSTRG.24782 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy2G03083 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8XLM1I K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.21AGFE K10779 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QCS8A7 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 (CHR17)%3B FUNCTIONS IN: in 7 functions%3B INVOLVED IN: ATP-dependent chromatin remodeling%2C chromatin remodeling%3B LOCATED IN: nucleus%2C chromatin remodeling complex%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C nucleosome remodelling ISWI%2C HAND domain (InterPro:IPR015194)%2C SANT%2C eukarya (InterPro:IPR017884)%2C SNF2-related (InterPro:IPR000330)%2C SANT%2C DNA-binding (InterPro:IPR001005)%2C SLIDE (InterPro:IPR015195)%2C Homeodomain-like (InterPro:IPR009057)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: chromatin-remodeling protein 11 (TAIR:AT3G06400.2)%3B Has 25189 Blast hits to 20364 proteins in 2195 species: Archae - 142%3B Bacteria - 5972%3B Metazoa - 6064%3B Fungi - 4945%3B Plants - 1903%3B Viruses - 481%3B Other Eukaryotes - 5682 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0706G043 AmTr_v1.0_scaffold00057 - View
Brassica carinata BcaB08g36657 ChrB08 + View
Brassica carinata BcaC05g30030 ChrC05 - View
Brassica napus C09p57830 C09 + View
Brassica napus A02p05050 A02 - View
Brassica napus C02p10100 C02 - View
Brassica napus A10p20940 A10 + View
Brassica oleracea BolC9t58653H C9 + View
Brassica rapa BraA10t44159Z A10 + View
Cannabis sativa CANSAT78G2178 NC_044376.1 - View
Cicer arietinum L. Ca_21543_v3 Ca_LG7_v3 - View
Cicer arietinum L. Ca_00564_v3 Ca_LG1_v3 - View
Corylus avellana Haze_01251 Similar to CHR11: ISWI chromatin-remodeling complex ATPase CHR11 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc03_g02210 Putative chromatin-remodeling complex ATPase chain chr3 - View
Citrus clementina Ciclev10004220m.g scaffold_9 + View
Ceratophyllum demersum CDE05G1697 3 + View
Cardamine hirsuta CARHR194400 Chromatin-remodeling protein 11 Chr6 + View
Carya illinoinensis CiPaw.02G085600 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Chr02 - View
Carya illinoinensis CiPaw.01G152100 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Chr01 - View
Citrullus lanatus ClCG06G005340 chromatin-remodeling protein 11 LENGTH=1057 CG_Chr06 - View
Cucumis melo MELO3C021353.2 Chromatin remodeling factor, putative chr11 + View
Corchorus olitorius COL.COLO4_13917 SNF2-related protein AWUE01015337.1 - View
Capsella rubella Carub.0006s1690 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) scaffold_6 - View
Cucumis sativus L. CsaV3_6G017380 Chromatin-remodeling complex ATPase chr6 - View
Davidia involucrata Dinv44417 GWHABJS00000014 + View
Davidia involucrata Dinv38315 GWHABJS00000016 + View
Durio zibethinus Duzib052G0958 NW_019167849.1 + View
Durio zibethinus Duzib212G0144 NW_019168026.1 - View
Eucalyptus grandis Eucgr.H03784 Chr08 + View
Eucalyptus grandis Eucgr.H03855 Chr08 + View
Erythranthe guttata Migut.G00196 scaffold_7 - View
Erythranthe guttata Migut.N00114 scaffold_14 - View
Eutrema salsugineum Thhalv10012527m.g scaffold_2 - View
Fragaria x ananassa FAN12G3941 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Fvb4-3 + View
Fragaria x ananassa FAN17G2543 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Fvb4-2 - View
Fragaria x ananassa FAN12G3725 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Fvb4-3 - View
Fragaria x ananassa FAN07G2499 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Fvb4-4 - View
Fragaria vesca FvH4_4g17400 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Fvb4 + View
Gossypium hirsutum Gohir.A02G047300 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) A02 + View
Gossypium hirsutum Gohir.A10G161000 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) A10 + View
Gossypium hirsutum Gohir.D02G052600 PF00271//PF04851//PF09110//PF09111//PF13892 - Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // HAND (HAND) // SLIDE (SLIDE) // DNA-binding domain (DBINO) D02 + View
Glycine max Glyma.07G250700 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Gm07 - View
Glycine max Glyma.15G097000 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Gm15 - View
Glycine max Glyma.13G215900 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Gm13 + View
Gossypium raimondii Gorai.005G058400 Chr05 + View
Lupinus albus Lalb_Chr18g0055671 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Lalb_Chr18 - View
Lupinus albus Lalb_Chr20g0118061 PF00271//PF09110//PF09111 - Helicase conserved C-terminal domain (Helicase_C) // HAND (HAND) // SLIDE (SLIDE) Lalb_Chr20 - View
Lotus japonicus LjContig00389g0006961 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Contig00389 + View
Lonicera japonica Lj7A730T43 GWHAAZE00000007 - View
Lonicera japonica Lj6C670T12 GWHAAZE00000006 + View
Lonicera japonica Lj3C812G10 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_5_52080 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI18_g12430_MAGBIO AED:0.15 Chr18 + View
Malus domestica MD16G1173900 chromatin remodeling factor17 Chr16 - View
Malus domestica MD13G1172500 chromatin-remodeling protein 11 Chr13 - View
Manihot esculenta Manes.15G015800 Chromosome15 - View
Manihot esculenta Manes.03G191900 Chromosome03 + View
Medicago truncatula Medtr2g020000 chromatin remodeling factor, putative chr2 - View
Nelumbo nucifera Nn3g21341 chr3 + View
Nicotiana tabacum Nitab4.5_0000829g0150 ISWI HAND domain, SNF2-related, Helicase, C-terminal, Homeodomain-like, SANT domain, SLIDE domain, P-loop containing nucleoside triphosphate hydrolase, SANT/Myb domain, Helicase, superfamily 1/2, ATP-binding domain Nitab4.5_0000829 + View
Nicotiana tabacum Nitab4.5_0001459g0150 Homeodomain-like, P-loop containing nucleoside triphosphate hydrolase, SNF2-related, ISWI HAND domain, SLIDE domain, Helicase, C-terminal, SANT domain, Helicase, superfamily 1/2, ATP-binding domain, SANT/Myb domain Nitab4.5_0001459 - View
Nicotiana tabacum Nitab4.5_0002986g0070 Helicase, superfamily 1/2, ATP-binding domain, Homeodomain-like, Helicase, C-terminal, ISWI HAND domain, P-loop containing nucleoside triphosphate hydrolase, SNF2-related, SANT domain, SANT/Myb domain, SLIDE domain Nitab4.5_0002986 + View
Olea europaea Oeu026198.1 chr17 + View
Olea europaea Oeu029265.2 scaffold244 - View
Petunia axillaris Peaxi162Scf00033g01321 Chromatin-remodeling complex ATPase chain Iswi Peaxi162Scf00033 - View
Petunia axillaris Peaxi162Scf00386g00817 Chromatin-remodeling complex ATPase chain Iswi Peaxi162Scf00386 - View
Prunus persica Prupe.1G140700 Pp01 - View
Pisum sativum Psat1g187480 SNF2 family N-terminal domain chr1LG6 + View
Pisum sativum Psat4g029280 SNF2 family N-terminal domain chr4LG4 - View
Papaver somniferum PSO210G7761 NC_039359.1 + View
Papaver somniferum PSO170G0309 NC_039360.1 + View
Populus trichocarpa Potri.008G205600 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Chr08 + View
Phaseolus vulgaris Phvul.003G101700 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Chr03 - View
Phaseolus vulgaris Phvul.003G100200 Chr03 - View
Phaseolus vulgaris Phvul.006G162200 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Chr06 + View
Rosa chinensis RcHm_v2.0_Chr4g0421321 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0217800 chr04 + View
Rhododendron simsii Rhsim02G0012600 chr02 - View
Striga asiatica SGA_v2.0_scaffold57G20227 scaffold57 + View
Salvia bowleyana SalBow5G1000 GWHASIU00000003 - View
Salvia bowleyana SalBow2G0378 GWHASIU00000007 + View
Salvia bowleyana SalBow5G5362 GWHASIU00000003 + View
Salix brachista Sabra08G0156300 GWHAAZH00000008 - View
Salix brachista Sabra10G0016100 GWHAAZH00000010 - View
Simmondsia chinensis Sc19g0004980 GWHAASQ00000019 + View
Sechium edule Sed0007625 LG04 - View
Sapria himalayana SHI00289 scaffold1_25991295 - View
Solanum lycopersicum Solyc01g067390.4 RNA helicase DEAH-box1 SL4.0ch01 + View
Solanum lycopersicum Solyc06g054560.3 RNA helicase DEAH-box19 SL4.0ch06 + View
Schrenkiella parvula Sp6g25710 K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) ch6-6 + View
Solanum pennellii Sopen06g019630 Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. | chromatin-remodeling protein 11 (CHR11) | FUNCTIONS IN: in 7 functions | INVOLVED IN: cell growth, embryo sac development | LOCATED IN: nucleus, chromatin remodeling complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain , SANT, eukarya , SNF2-related , SANT, DNA-binding , SLIDE , Homeodomain-like , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 ., Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice), SNF2-related Spenn-ch06 + View
Solanum pennellii Sopen01g029280 Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. | chromatin-remodeling protein 11 (CHR11) | FUNCTIONS IN: in 7 functions | INVOLVED IN: cell growth, embryo sac development | LOCATED IN: nucleus, chromatin remodeling complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain , SANT, eukarya , SNF2-related , SANT, DNA-binding , SLIDE , Homeodomain-like , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 ., Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice), SNF2-related Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400030785 Helicase ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400022675 Helicase ST4.03ch01 + View
Selenicereus undatus Hund20594 Scaffold_33673 + View
Trochodendron aralioides TAR633G1410 group2 + View
Trochodendron aralioides TAR636G2253 group1 + View
Trochodendron aralioides TAR362G0596 group17 - View
Theobroma cacao Thecc.04G279200 Chromatin-remodeling protein 11 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104820235 chromatin structure-remodeling complex protein SYD isoform X1 NW_010966178.1 - View
Tarenaya hassleriana THA.LOC104803106 ISWI chromatin-remodeling complex ATPase CHR11-like NW_010970490.1 - View
Trifolium pratense TPR.G1518 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI73G0509 NC_052232.1 - View
Vaccinium macrocarpon vmacro22484 Similar to CHR11: ISWI chromatin-remodeling complex ATPase CHR11 (Arabidopsis thaliana OX%3D3702) scaffold00380_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro15253 Similar to CHR11: ISWI chromatin-remodeling complex ATPase CHR11 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1275 CM024074.1 - View
Vigna mungo VMungo0540G0816 CM024075.1 - View
Vitis vinifera GSVIVG01017791001 chr5 - View