Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039455 Lateral root primordium protein-related, putative [Theobroma cacao] Chr2 + View
CSS0041868 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nicotiana tomentosiformis] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14880 LG-1 - View
Aethionema arabicum Aa31LG4G19170 LG-4 + View
Acer truncatum Atru.chr13.368 chr13 + View
Acer truncatum Atru.chr3.746 chr3 + View
Actinidia chinensis Actinidia22499 Lachesis_group28 + View
Actinidia chinensis Actinidia29800 Lachesis_group27 + View
Actinidia chinensis Actinidia00562 Lachesis_group12 + View
Actinidia chinensis Actinidia15382 Lachesis_group26 + View
Actinidia chinensis Actinidia11743 Lachesis_group25 - View
Actinidia chinensis Actinidia26109 Lachesis_group25 - View
Actinidia chinensis Actinidia19231 Lachesis_group8 + View
Arabidopsis lyrata AL5G31480 scaffold_5 + View
Arabidopsis lyrata AL3G51310 scaffold_3 - View
Avicennia marina MSTRG.1233 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25212 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.24269 ScioBoG_4088_HRSCAF_4107 + View
Avicennia marina MSTRG.23272 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.2500 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy6G02432 CHR06 + View
Aquilegia oxysepala Aqoxy5G01509 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NWGY5G PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8SWZ13 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T9K83P PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AAQ8XF PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G43XWA PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT5G66350 Lateral root primordium (LRP) protein-like protein A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. Shi mutant is dominant%2C has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. SHORT INTERNODES (SHI)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G51060 Lateral root primordium (LRP) protein-like protein A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style%2C stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) STYLISH 1 (STY1)%3B FUNCTIONS IN: protein heterodimerization activity%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 6 plant structures%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1)%3B Has 244 Blast hits to 244 proteins in 44 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 38%3B Fungi - 9%3B Plants - 179%3B Viruses - 0%3B Other Eukaryotes - 18 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G75520 SHI-related sequence 5 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence 5 (SRS5)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2)%3B Has 299 Blast hits to 299 proteins in 34 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 11%3B Fungi - 2%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 104 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC06g34690 ChrC06 + View
Brassica carinata BcaNung00400 Contig74 - View
Brassica carinata BcaNung00743 Contig350 + View
Brassica carinata BcaB01g00550 ChrB01 - View
Brassica carinata BcaC03g15585 ChrC03 - View
Brassica napus C06p49510 C06 - View
Brassica napus A01p23670 A01 - View
Brassica napus C01p02680 C01 + View
Brassica napus A09p44150 A09 + View
Brassica napus A07p41060 A07 - View
Brassica napus A01p02480 A01 + View
Brassica oleracea BolC7t43077H C7 - View
Brassica oleracea BolC6t39990H C6 - View
Brassica oleracea BolC1t00258H C1 + View
Brassica oleracea BolC8t50254H C8 + View
Brassica rapa BraA01t00235Z A01 + View
Brassica rapa BraA07t29480Z A07 - View
Brassica rapa BraA07t31643Z A07 - View
Brassica rapa BraA09t39876Z A09 + View
Beta vulgaris EL10Ac1g00566 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr1_EL10_PGA_scaffold3 + View
Beta vulgaris EL10As8g23869 PF05142 - Domain of unknown function (DUF702) (DUF702) Scaffold_0008 + View
Capsicum annuum CAN.G358.17 PGAv.1.6.scaffold358 + View
Capsicum annuum CAN.G851.21 PGAv.1.6.scaffold851 + View
Cannabis sativa CANSAT01G0495 NC_044373.1 + View
Cicer arietinum L. Ca_24881_v3 Ca_LG8_v3 + View
Cicer arietinum L. Ca_02064_v3 Ca_LG1_v3 + View
Corylus avellana Haze_03824 Similar to SHI: Protein SHORT INTERNODES (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22577 Similar to SRS7: Protein SHI RELATED SEQUENCE 7 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc07_g10250 Putative Lateral root primordium (LRP) protein-related chr7 - View
Coffea canephora Cc10_g02200 Putative SHI-related sequence 5 chr10 + View
Coffea canephora Cc02_g17110 Putative Lateral root primordium (LRP) protein-related chr2 + View
Citrus clementina Ciclev10001824m.g scaffold_5 - View
Carpinus fangiana Cfa013898 Cfa05 - View
Carpinus fangiana Cfa006925 Cfa02 - View
Cardamine hirsuta CARHR160640 Lateral root primordium (LRP) protein-like protein Chr5 + View
Cardamine hirsuta CARHR068920 SHI-related sequence 5 Chr2 - View
Carya illinoinensis CiPaw.07G054700 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr07 - View
Carya illinoinensis CiPaw.07G154800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr07 + View
Carya illinoinensis CiPaw.06G131200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr06 + View
Carya illinoinensis CiPaw.08G062200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr08 - View
Carya illinoinensis CiPaw.08G136600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr08 + View
Citrullus lanatus ClCG07G008820 SHI-related sequence 8 LENGTH=173 CG_Chr07 - View
Citrullus lanatus ClCG01G020040 Lateral root primordium family protein CG_Chr01 - View
Citrullus lanatus ClCG08G014580 Lateral root primordium family protein CG_Chr08 + View
Citrullus lanatus ClCG05G018620 Lateral root primordium family protein CG_Chr05 + View
Cucumis melo MELO3C010984.2 Protein SHI RELATED SEQUENCE 1 chr03 + View
Cucumis melo MELO3C007877.2 Protein SHI RELATED SEQUENCE 1 chr08 - View
Corchorus olitorius COL.COLO4_21983 Zinc finger%2C lateral root primordium type 1 AWUE01017840.1 - View
Carica papaya Cpa.g.sc6.196 supercontig_6 + View
Carica papaya Cpa.g.sc140.14 supercontig_140 + View
Chenopodium quinoa AUR62034552 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1522 - View
Chenopodium quinoa AUR62014445 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1566 + View
Chenopodium quinoa AUR62007636 SRS3: Protein SHI RELATED SEQUENCE 3 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0003s3226 scaffold_3 - View
Capsella rubella Carub.0005s1746 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_5 + View
Capsella rubella Carub.0008s2816 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_8 + View
Capsella rubella Carub.0002s2238 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_2 - View
Capsella rubella Carub.0007s0398 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_4G005360 protein SHI RELATED SEQUENCE 1-like chr4 + View
Cucumis sativus L. CsaV3_6G046800 protein SHI RELATED SEQUENCE 1 chr6 - View
Cucumis sativus L. CsaV3_3G045570 protein SHI RELATED SEQUENCE 1 chr3 - View
Daucus carota DCAR_013845 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_025983 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_017328 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv39479 GWHABJS00000011 - View
Davidia involucrata Dinv42019 GWHABJS00000002 - View
Davidia involucrata Dinv31805 GWHABJS00000002 - View
Davidia involucrata Dinv40041 GWHABJS00000014 + View
Davidia involucrata Dinv33587 GWHABJS00000012 - View
Davidia involucrata Dinv23477 GWHABJS00000005 + View
Durio zibethinus Duzib093G0081 NW_019167937.1 - View
Durio zibethinus Duzib248G0091 NW_019168048.1 - View
Durio zibethinus Duzib116G0506 NW_019167949.1 + View
Durio zibethinus Duzib041G0759 NW_019167826.1 + View
Durio zibethinus Duzib052G0521 NW_019167849.1 - View
Durio zibethinus Duzib264G1253 NW_019167960.1 + View
Erigeron canadensis ECA232G4901 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA232G2385 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F01614 Chr06 - View
Eucalyptus grandis Eucgr.J02389 Chr10 - View
Eucalyptus grandis Eucgr.I01308 Chr09 - View
Eucalyptus grandis Eucgr.I02379 Chr09 + View
Erythranthe guttata Migut.B00196 scaffold_2 - View
Erythranthe guttata Migut.N03122 scaffold_14 - View
Erythranthe guttata Migut.L00031 scaffold_12 - View
Eutrema salsugineum Thhalv10019655m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10004509m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10010460m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_16 - View
Fragaria x ananassa FAN19G0380 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-4 - View
Fragaria x ananassa FAN15G0801 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-4 - View
Fragaria x ananassa FAN27G2239 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-1 + View
Fragaria x ananassa FAN28G1832 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-1 + View
Fragaria x ananassa FAN23G0399 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-3 - View
Fragaria x ananassa FAN26G1640 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-2 - View
Fragaria vesca FvH4_2g38950 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2 + View
Fragaria vesca FvH4_1g12410 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1 - View
Gossypium hirsutum Gohir.D03G011400 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED D03 - View
Gossypium hirsutum Gohir.D06G002300 PF05142 - Domain of unknown function (DUF702) (DUF702) D06 + View
Gossypium hirsutum Gohir.A03G197800 PF05142 - Domain of unknown function (DUF702) (DUF702) A03 - View
Gossypium hirsutum Gohir.D02G209800 PF05142 - Domain of unknown function (DUF702) (DUF702) D02 - View
Gossypium hirsutum Gohir.A02G168600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED A02 + View
Gossypium hirsutum Gohir.A01G113350 PF05142 - Domain of unknown function (DUF702) (DUF702) A01 + View
Gossypium hirsutum Gohir.A06G006400 PF05142 - Domain of unknown function (DUF702) (DUF702) A06 + View
Gossypium hirsutum Gohir.A05G188900 PF05142 - Domain of unknown function (DUF702) (DUF702) A05 + View
Gossypium hirsutum Gohir.A11G178800 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED A11 - View
Glycine max Glyma.17G255000 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm17 - View
Glycine max Glyma.01G170700 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm01 - View
Glycine max Glyma.12G039100 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm12 + View
Glycine max Glyma.11G072500 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm11 + View
Glycine max Glyma.02G051900 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm02 - View
Glycine max Glyma.06G009200 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm06 + View
Glycine max Glyma.16G132100 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm16 - View
Glycine max Glyma.06G027500 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm06 + View
Glycine max Glyma.04G027400 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm04 + View
Gossypium raimondii Gorai.010G006800 Chr10 + View
Gossypium raimondii Gorai.002G125600 Chr02 + View
Gossypium raimondii Gorai.009G197300 Chr09 + View
Gossypium raimondii Gorai.005G247100 Chr05 - View
Gossypium raimondii Gorai.003G011800 Chr03 - View
Helianthus annuus HanXRQChr09g0260731 Probable lateral root primordium (LRP) protein-related HanXRQChr09 - View
Helianthus annuus HanXRQChr11g0325601 Putative protein of unknown function DUF702 HanXRQChr11 - View
Hydrangea macrophylla Hma1.2p1_0773F.1_g216100 Hma1.2p1_0773F.1 - View
Hydrangea macrophylla Hma1.2p1_0066F.1_g035950 Hma1.2p1_0066F.1 + View
Lupinus albus Lalb_Chr01g0002291 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr01 + View
Lupinus albus Lalb_Chr14g0369671 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr14 - View
Lupinus albus Lalb_Chr09g0322101 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr11g0062101 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr11 + View
Lupinus albus Lalb_Chr23g0266341 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr23 + View
Lotus japonicus Lj3g0013386 PF05142 - Domain of unknown function (DUF702) (DUF702) chr3 + View
Lotus japonicus Lj5g0027236 PF05142 - Domain of unknown function (DUF702) (DUF702) chr5 + View
Lotus japonicus Lj2g0022541 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED chr2 + View
Lotus japonicus Lj1g0023817 PF05142 - Domain of unknown function (DUF702) (DUF702) chr1 + View
Lonicera japonica Lj4A30T28 GWHAAZE00000004 + View
Lonicera japonica Lj2A461T35 GWHAAZE00000002 - View
Lonicera japonica Lj4C212T5 GWHAAZE00000004 - View
Lonicera japonica Lj5P192T30 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_149681 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_26401 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD08G1021500 SHI-related sequence 7 Chr08 - View
Malus domestica MD02G1137000 Lateral root primordium (LRP) protein-related Chr02 + View
Malus domestica MD15G1250700 Lateral root primordium (LRP) protein-related Chr15 + View
Malus domestica MD15G1019200 SHI-related sequence 7 Chr15 - View
Manihot esculenta Manes.02G100100 Chromosome02 + View
Manihot esculenta Manes.18G018200 Chromosome18 + View
Manihot esculenta Manes.05G153200 Chromosome05 + View
Manihot esculenta Manes.01G141500 Chromosome01 + View
Medicago truncatula Medtr3g112510 transcription factor, putative chr3 - View
Medicago truncatula Medtr8g076620 zinc finger, LRP1 type protein chr8 + View
Medicago truncatula Medtr5g021130 transcription factor, putative chr5 + View
Nelumbo nucifera Nn5g29169 chr5 - View
Nelumbo nucifera Nn6g32192 chr6 - View
Nicotiana tabacum Nitab4.5_0002266g0010 Lateral Root Primordium type 1, C-terminal, Protein of unknown function DUF702 Nitab4.5_0002266 - View
Nicotiana tabacum Nitab4.5_0002221g0020 Protein of unknown function DUF702, Zinc finger, lateral root primordium type 1, Lateral Root Primordium type 1, C-terminal Nitab4.5_0002221 - View
Nicotiana tabacum Nitab4.5_0000136g0130 Lateral Root Primordium type 1, C-terminal, Zinc finger, lateral root primordium type 1, Protein of unknown function DUF702 Nitab4.5_0000136 + View
Olea europaea Oeu037717.1 chr18 - View
Olea europaea Oeu030401.1 chr14 + View
Petunia axillaris Peaxi162Scf00010g00077 SHI-related sequence 4 Peaxi162Scf00010 + View
Punica granatum PGR102G0489 NC_045129.1 + View
Punica granatum PGR031G1427 NC_045127.1 + View
Punica granatum PGR119G2466 NC_045132.1 + View
Punica granatum PGR083G1590 NC_045133.1 + View
Punica granatum PGR142G0796 NC_045128.1 + View
Prunus persica Prupe.1G371500 PF05142 - Domain of unknown function (DUF702) (DUF702) Pp01 - View
Prunus persica Prupe.7G163600 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Pp07 - View
Pisum sativum Psat2g157000 Domain of unknown function (DUF702) chr2LG1 - View
Pisum sativum Psat4g096720 Domain of unknown function (DUF702) chr4LG4 - View
Papaver somniferum PSO675G4425 NC_039358.1 - View
Papaver somniferum PSO210G3541 NC_039359.1 - View
Papaver somniferum PSO170G0907 NC_039360.1 + View
Papaver somniferum PSO541G2701 NC_039363.1 - View
Populus trichocarpa Potri.004G160600 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr04 - View
Populus trichocarpa Potri.005G234200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr05 - View
Populus trichocarpa Potri.005G118200 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr05 - View
Populus trichocarpa Potri.002G028500 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr02 + View
Populus trichocarpa Potri.007G017500 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr07 - View
Phaseolus vulgaris Phvul.009G013700 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr09 - View
Phaseolus vulgaris Phvul.003G258100 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr03 + View
Phaseolus vulgaris Phvul.001G009800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr01 + View
Quercus lobata QL06p034582 6 + View
Quercus lobata QL02p010571 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0302041 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr2g0100271 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim07G0244300 chr07 - View
Rhododendron simsii Rhsim10G0214700 chr10 + View
Rhododendron simsii Rhsim08G0124000 chr08 - View
Striga asiatica SGA_v2.0_scaffold11G05857 scaffold11 - View
Striga asiatica SGA_v2.0_scaffold280G46850 scaffold280 + View
Salvia bowleyana SalBow8G3048 GWHASIU00000004 - View
Salvia bowleyana SalBow7G3053 GWHASIU00000005 - View
Salix brachista Sabra05G0180500 GWHAAZH00000005 - View
Salix brachista Sabra02G0022600 GWHAAZH00000002 + View
Salix brachista Sabra09G0093900 GWHAAZH00000009 - View
Salix brachista Sabra07G0014900 GWHAAZH00000007 - View
Simmondsia chinensis Sc16g0002390 GWHAASQ00000016 + View
Simmondsia chinensis Sc15g0007240 GWHAASQ00000015 - View
Simmondsia chinensis Sc26g0003290 GWHAASQ00000026 + View
Simmondsia chinensis Sc03g0003310 GWHAASQ00000003 - View
Sechium edule Sed0012125 LG14 - View
Sechium edule Sed0009988 LG01 + View
Sechium edule Sed0001986 LG07 - View
Sechium edule Sed0014670 LG10 - View
Sapria himalayana SHI08593 scaffold7_18583372 + View
Sapria himalayana SHI08111 scaffold7_18583372 + View
Solanum lycopersicum Solyc02g084680.3 Protein SHI RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G3AAR0_CAPAN),Pfam:PF05142 SL4.0ch02 + View
Solanum lycopersicum Solyc04g080970.4 Protein SHI RELATED SEQUENCE 1 (AHRD V3.3 *** A0A2G3CQY9_CAPCH) SL4.0ch04 - View
Solanum lycopersicum Solyc03g033680.1 Expression of terpenoids 2 (AHRD V3.3 *-* U5L363_SOLLC) SL4.0ch03 + View
Solanum lycopersicum Solyc02g062400.3 Expression of terpenoids 1 (AHRD V3.3 *** K4B6C9_SOLLC) SL4.0ch02 + View
Schrenkiella parvula Sp2g30370 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED ch2-4 - View
Schrenkiella parvula Sp1g17600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch1-1 - View
Schrenkiella parvula Sp5g30650 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch5-7 - View
Schrenkiella parvula Sp5g11150 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED ch5-1 - View
Solanum pennellii Sopen02g013400 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen04g034580 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch04 - View
Solanum pennellii Sopen02g029350 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen03g006470 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch03 + View
Solanum pennellii Sopen01g052300 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. | SHI-related sequence 5 (SRS5) | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400022540 Short internodes 2 ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400015516 Short internodes 2 ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400003761 DNA-binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400030969 Transcription factor ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400003616 Transcription factor ST4.03ch02 + View
Selenicereus undatus Hund06264 Scaffold_33676 - View
Selenicereus undatus Hund16466 Scaffold_33677 - View
Selenicereus undatus Hund14018 Scaffold_33679 - View
Selenicereus undatus Hund26875 Scaffold_2055 + View
Selenicereus undatus Hund17210 Scaffold_33675 - View
Trochodendron aralioides TAR628G0913 group5 - View
Trochodendron aralioides TAR376G0411 group14 - View
Trochodendron aralioides TAR625G1372 group4 + View
Trochodendron aralioides TAR381G1719 group11 + View
Theobroma cacao Thecc.01G025100 Lateral root primordium protein-related Chromosome_1 - View
Theobroma cacao Thecc.08G036500 SHI-related sequence 7 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104804251 protein SHI RELATED SEQUENCE 2-like isoform X3 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104821312 protein SHI RELATED SEQUENCE 1-like NW_010966459.1 + View
Trifolium pratense TPR.G2408 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI53G1955 NC_052244.1 - View
Tripterygium wilfordii TWI36G0504 NC_052237.1 - View
Tripterygium wilfordii TWI73G0664 NC_052232.1 + View
Tripterygium wilfordii TWI79G1686 NC_052238.1 + View
Vaccinium macrocarpon vmacro17733 Similar to SHI: Protein SHORT INTERNODES (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0839 CM024073.1 + View
Vigna mungo VMungo0251G2569 CM024069.1 + View
Vigna mungo VMungo1309G1130 CM024072.1 - View
Vigna mungo VMungo1215G2159 CM024074.1 + View
Vitis vinifera GSVIVG01024206001 chr3 - View
Vitis vinifera GSVIVG01018845001 chr4 - View
Vitis vinifera GSVIVG01009812001 chr18 - View