Gene: Carub.0008s2816

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2816
  • Transcript Identifier Carub.0008s2816.1
  • Gene Type Coding gene
  • Location scaffold_8 : 13203349-13204783 : positive

Gene Family Information

  • ID HOM05D000711
  • #Genes/#Species 809/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2816.v1.1
  • pacid 39250319
  • synonym Carubv10026733m.g

Descriptions

  • Description PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway AT5G66350
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT5G66350
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT5G66350
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G66350
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT5G66350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G66350
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G66350
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT5G66350
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G66350

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G66350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006510 Zinc finger, lateral root primordium type 1
IPR006511 SHORT INTERNODES, C-terminal
IPR007818 SHI protein family
Mapman id Description
15.5.45 RNA biosynthesis.transcriptional regulation.transcription factor (SRS)