Aethionema arabicum |
Aa31LG1G21930 |
|
LG-1 |
- |
View |
Aethionema arabicum |
Aa31LG4G14570 |
|
LG-4 |
- |
View |
Acer truncatum |
Atru.chr3.3667 |
|
chr3 |
- |
View |
Acer truncatum |
Atru.chr8.1882 |
|
chr8 |
- |
View |
Actinidia chinensis |
Actinidia40035 |
|
Lachesis_group22 |
- |
View |
Actinidia chinensis |
Actinidia19689 |
|
Lachesis_group17 |
- |
View |
Actinidia chinensis |
Actinidia24090 |
|
Lachesis_group24 |
+ |
View |
Actinidia chinensis |
Actinidia07126 |
|
Lachesis_group13 |
+ |
View |
Arabidopsis lyrata |
AL6G12430 |
|
scaffold_6 |
+ |
View |
Arabidopsis lyrata |
AL8G37070 |
|
scaffold_8 |
+ |
View |
Avicennia marina |
MSTRG.18652 |
|
ScioBoG_22153_HRSCAF_22259 |
+ |
View |
Avicennia marina |
MSTRG.5734 |
|
ScioBoG_102839_HRSCAF_103093 |
+ |
View |
Avicennia marina |
MSTRG.19151 |
|
ScioBoG_25048_HRSCAF_25167 |
+ |
View |
Aquilegia oxysepala |
Aqoxy4G03249 |
|
CHR04 |
+ |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.1N290L |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
arahy.Tifrunner.gnm1.Arahy.02 |
- |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.MH5UWC |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
arahy.Tifrunner.gnm1.Arahy.06 |
+ |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.DX8F1P |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
arahy.Tifrunner.gnm1.Arahy.16 |
+ |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.AM735H |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
arahy.Tifrunner.gnm1.Arahy.12 |
- |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.YDP8E4 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
arahy.Tifrunner.gnm1.Arahy.13 |
- |
View |
Arabidopsis thaliana |
AT5G60470 |
C2H2 and C2HC zinc fingers superfamily protein C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: stem%2C sepal%2C carpel%2C stamen%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Zinc finger%2C double-stranded RNA binding (InterPro:IPR022755)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G45260.1)%3B Has 38003 Blast hits to 17147 proteins in 232 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 35900%3B Fungi - 231%3B Plants - 711%3B Viruses - 1%3B Other Eukaryotes - 1160 (source: NCBI BLink). |
Chr5 |
+ |
View |
Arabidopsis thaliana |
AT5G03150 |
C2H2-like zinc finger protein JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex%2C increased cell numbers in the cortical and epidermal layers%2C a disrupted QC marker expression pattern%2C and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning%2C as well as another zinc finger transcription factor%2C MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR%2C but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus%2C particularly in QC cells%2C but this may be indirect. JACKDAW (JKD)%3B FUNCTIONS IN: protein binding%2C protein homodimerization activity%2C sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of epidermal cell differentiation%2C regulation of meristem growth%2C regulation of cell division%2C root development%2C regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Zinc finger%2C double-stranded RNA binding (InterPro:IPR022755)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1)%3B Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0%3B Bacteria - 66%3B Metazoa - 49427%3B Fungi - 692%3B Plants - 856%3B Viruses - 6%3B Other Eukaryotes - 5532 (source: NCBI BLink). |
Chr5 |
+ |
View |
Brassica carinata |
BcaB01g05854 |
|
ChrB01 |
- |
View |
Brassica carinata |
BcaC03g13025 |
|
ChrC03 |
- |
View |
Brassica carinata |
BcaB05g21849 |
|
ChrB05 |
- |
View |
Brassica napus |
C03p01350 |
|
C03 |
+ |
View |
Brassica napus |
A10p32780 |
|
A10 |
- |
View |
Brassica napus |
A03p01040 |
|
A03 |
+ |
View |
Brassica napus |
C09p73650 |
|
C09 |
- |
View |
Brassica napus |
C02p00840 |
|
C02 |
+ |
View |
Brassica oleracea |
BolC9t60095H |
|
C9 |
- |
View |
Brassica oleracea |
BolC2t06081H |
|
C2 |
+ |
View |
Brassica oleracea |
BolC3t12693H |
|
C3 |
+ |
View |
Brassica rapa |
BraA10t45312Z |
|
A10 |
- |
View |
Brassica rapa |
BraA03t09485Z |
|
A03 |
+ |
View |
Beta vulgaris |
EL10Ac7g16535 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Chr7_EL10_PGA_scaffold5 |
+ |
View |
Cannabis sativa |
CANSAT54G1826 |
|
NC_044375.1 |
+ |
View |
Cicer arietinum L. |
Ca_11462_v3 |
|
Ca_LG4_v3 |
+ |
View |
Corylus avellana |
Haze_20615 |
Similar to JKD: Zinc finger protein JACKDAW (Arabidopsis thaliana OX%3D3702) |
10 |
- |
View |
Corylus avellana |
Haze_23885 |
Similar to BIB: Zinc finger protein BALDIBIS (Arabidopsis thaliana OX%3D3702) |
6 |
- |
View |
Coffea canephora |
Cc06_g03810 |
Putative uncharacterized protein |
chr6 |
+ |
View |
Coffea canephora |
Cc01_g11310 |
Putative uncharacterized protein |
chr1 |
- |
View |
Citrus clementina |
Ciclev10011592m.g |
|
scaffold_6 |
- |
View |
Citrus clementina |
Ciclev10028294m.g |
|
scaffold_8 |
- |
View |
Carpinus fangiana |
Cfa011349 |
|
Cfa04 |
- |
View |
Carpinus fangiana |
Cfa017533 |
|
Cfa07 |
+ |
View |
Cardamine hirsuta |
CARHR274130 |
Zinc finger protein-like |
Chr8 |
+ |
View |
Cardamine hirsuta |
CARHR210210 |
Zinc finger family protein |
Chr6 |
- |
View |
Carya illinoinensis |
CiPaw.13G109300 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Chr13 |
+ |
View |
Carya illinoinensis |
CiPaw.10G134700 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Chr10 |
- |
View |
Carya illinoinensis |
CiPaw.09G177700 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Chr09 |
- |
View |
Citrullus lanatus |
ClCG03G002260 |
Zinc finger family protein |
CG_Chr03 |
- |
View |
Citrullus lanatus |
ClCG10G020380 |
Zinc finger protein |
CG_Chr10 |
- |
View |
Citrullus lanatus |
ClCG04G008920 |
Zinc finger protein |
CG_Chr04 |
+ |
View |
Cucumis melo |
MELO3C009332.2 |
protein indeterminate-domain 9 |
chr04 |
- |
View |
Cucumis melo |
MELO3C014250.2 |
protein indeterminate-domain 9 |
chr05 |
+ |
View |
Corchorus olitorius |
COL.COLO4_27043 |
Zinc finger%2C C2H2 |
AWUE01019423.1 |
- |
View |
Carica papaya |
Cpa.g.sc216.25 |
|
supercontig_216 |
- |
View |
Carica papaya |
Cpa.g.sc45.59 |
|
supercontig_45 |
+ |
View |
Chenopodium quinoa |
AUR62040055 |
Protein of unknown function |
C_Quinoa_Scaffold_4471 |
- |
View |
Capsella rubella |
Carub.0008s2116 |
PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN |
scaffold_8 |
+ |
View |
Capsella rubella |
Carub.0006s0194 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
scaffold_6 |
+ |
View |
Cucumis sativus L. |
CsaV3_6G039430 |
protein indeterminate-domain 9 |
chr6 |
+ |
View |
Cucumis sativus L. |
CsaV3_3G035720 |
protein indeterminate-domain 9 |
chr3 |
+ |
View |
Daucus carota |
DCAR_018822 |
hypothetical protein |
DCARv2_Chr5 |
- |
View |
Davidia involucrata |
Dinv35744 |
|
GWHABJS00000015 |
+ |
View |
Davidia involucrata |
Dinv32764 |
|
GWHABJS00000010 |
- |
View |
Davidia involucrata |
Dinv37274 |
|
GWHABJS00000021 |
- |
View |
Durio zibethinus |
Duzib106G1425 |
|
NW_019168492.1 |
- |
View |
Durio zibethinus |
Duzib093G0684 |
|
NW_019167937.1 |
- |
View |
Durio zibethinus |
Duzib128G0139 |
|
NW_019168481.1 |
- |
View |
Durio zibethinus |
Duzib150G0217 |
|
NW_019167882.1 |
+ |
View |
Durio zibethinus |
Duzib168G1581 |
|
NW_019168159.1 |
+ |
View |
Erigeron canadensis |
ECA248G3624 |
|
Conyza_canadensis_scaffold:9 |
+ |
View |
Erigeron canadensis |
ECA233G3935 |
|
Conyza_canadensis_scaffold:1 |
- |
View |
Erigeron canadensis |
ECA238G3341 |
|
Conyza_canadensis_scaffold:6 |
+ |
View |
Erigeron canadensis |
ECA238G4443 |
|
Conyza_canadensis_scaffold:6 |
- |
View |
Eucalyptus grandis |
Eucgr.J00939 |
|
Chr10 |
- |
View |
Eucalyptus grandis |
Eucgr.A01159 |
|
Chr01 |
+ |
View |
Eucalyptus grandis |
Eucgr.B02487 |
|
Chr02 |
+ |
View |
Erythranthe guttata |
Migut.J00556 |
|
scaffold_10 |
- |
View |
Eutrema salsugineum |
Thhalv10016023m.g |
PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN |
scaffold_2 |
- |
View |
Eutrema salsugineum |
Thhalv10013267m.g |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
scaffold_2 |
+ |
View |
Fragaria x ananassa |
FAN05G5821 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Fvb6-3 |
- |
View |
Fragaria x ananassa |
FAN09G2472 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Fvb6-2 |
- |
View |
Fragaria x ananassa |
FAN14G4299 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Fvb6-1 |
- |
View |
Fragaria x ananassa |
FAN16G0493 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Fvb3-3 |
- |
View |
Fragaria x ananassa |
FAN02G1019 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Fvb6-4 |
+ |
View |
Fragaria x ananassa |
FAN11G1839 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Fvb3-4 |
+ |
View |
Fragaria vesca |
FvH4_6g15680 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Fvb6 |
+ |
View |
Gossypium hirsutum |
Gohir.D09G146400 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
D09 |
- |
View |
Gossypium hirsutum |
Gohir.A04G074900 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
A04 |
- |
View |
Gossypium hirsutum |
Gohir.D04G113900 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
D04 |
- |
View |
Gossypium hirsutum |
Gohir.A09G150700 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
A09 |
- |
View |
Glycine max |
Glyma.03G179700 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Gm03 |
+ |
View |
Glycine max |
Glyma.12G171700 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Gm12 |
+ |
View |
Glycine max |
Glyma.19G180400 |
PTHR10593//PTHR10593:SF42//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW // SUBFAMILY NOT NAMED |
Gm19 |
+ |
View |
Glycine max |
Glyma.10G051500 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Gm10 |
+ |
View |
Glycine max |
Glyma.13G327500 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Gm13 |
- |
View |
Glycine max |
Glyma.11G155677 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Gm11 |
+ |
View |
Glycine max |
Glyma.13G139000 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Gm13 |
+ |
View |
Glycine max |
Glyma.12G070300 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Gm12 |
- |
View |
Gossypium raimondii |
Gorai.009G418600 |
|
Chr09 |
- |
View |
Gossypium raimondii |
Gorai.006G167600 |
|
Chr06 |
- |
View |
Helianthus annuus |
HanXRQChr07g0195611 |
Putative zinc finger, C2H2-like; Zinc finger, double-stranded RNA binding |
HanXRQChr07 |
- |
View |
Hydrangea macrophylla |
Hma1.2p1_0111F.1_g054130 |
|
Hma1.2p1_0111F.1 |
+ |
View |
Lupinus albus |
Lalb_Chr14g0374731 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Lalb_Chr14 |
- |
View |
Lupinus albus |
Lalb_Chr19g0137351 |
KOG3576 - Ovo and related transcription factors |
Lalb_Chr19 |
- |
View |
Lupinus albus |
Lalb_Chr02g0156221 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Lalb_Chr02 |
- |
View |
Lupinus albus |
Lalb_Chr01g0004231 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Lalb_Chr01 |
+ |
View |
Lotus japonicus |
Lj3g0010732 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
chr3 |
+ |
View |
Lotus japonicus |
Lj5g0010328 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
chr5 |
- |
View |
Lonicera japonica |
Lj2C110T9 |
|
GWHAAZE00000002 |
+ |
View |
Lonicera japonica |
Lj2A1030T63 |
|
GWHAAZE00000002 |
- |
View |
Lactuca sativa |
Lsat_1_v5_gn_1_65581 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Lsat_1_v8_lg_1 |
- |
View |
Lactuca sativa |
Lsat_1_v5_gn_2_98240 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Lsat_1_v8_lg_2 |
- |
View |
Malus domestica |
MD11G1133100 |
C2H2-like zinc finger protein |
Chr11 |
+ |
View |
Malus domestica |
MD12G1120300 |
C2H2-like zinc finger protein |
Chr12 |
- |
View |
Malus domestica |
MD03G1114800 |
C2H2-like zinc finger protein |
Chr03 |
- |
View |
Malus domestica |
MD04G1100300 |
C2H2-like zinc finger protein |
Chr04 |
- |
View |
Manihot esculenta |
Manes.11G142900 |
|
Chromosome11 |
+ |
View |
Manihot esculenta |
Manes.09G069600 |
|
Chromosome09 |
- |
View |
Manihot esculenta |
Manes.08G005700 |
|
Chromosome08 |
+ |
View |
Manihot esculenta |
Manes.04G023700 |
|
Chromosome04 |
- |
View |
Medicago truncatula |
Medtr2g093960 |
C2H2-type zinc finger protein |
chr2 |
+ |
View |
Nelumbo nucifera |
Nn2g13065 |
|
chr2 |
+ |
View |
Nelumbo nucifera |
Nn2g10748 |
|
chr2 |
+ |
View |
Olea europaea |
Oeu014966.1 |
|
chr11 |
- |
View |
Olea europaea |
Oeu005339.1 |
|
scaffold1197 |
- |
View |
Olea europaea |
Oeu059979.1 |
|
chr20 |
+ |
View |
Olea europaea |
Oeu001347.1 |
|
chr9 |
- |
View |
Olea europaea |
Oeu001261.1 |
|
scaffold1031 |
- |
View |
Petunia axillaris |
Peaxi162Scf00472g00007 |
C2H2-like zinc finger protein |
Peaxi162Scf00472 |
- |
View |
Punica granatum |
PGR004G1524 |
|
NC_045131.1 |
- |
View |
Punica granatum |
PGR142G0926 |
|
NC_045128.1 |
+ |
View |
Prunus persica |
Prupe.6G098800 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Pp06 |
+ |
View |
Prunus persica |
Prupe.6G238500 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Pp06 |
- |
View |
Pisum sativum |
Psat3g044080 |
Zinc-finger double-stranded RNA-binding |
chr3LG5 |
- |
View |
Papaver somniferum |
PSO339G2599 |
|
NC_039366.1 |
+ |
View |
Papaver somniferum |
PSO063G3826 |
|
NC_039364.1 |
- |
View |
Papaver somniferum |
PSO384G3817 |
|
NC_039368.1 |
- |
View |
Papaver somniferum |
PSO339G1214 |
|
NC_039366.1 |
- |
View |
Populus trichocarpa |
Potri.006G129300 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Chr06 |
- |
View |
Populus trichocarpa |
Potri.016G088500 |
PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW |
Chr16 |
+ |
View |
Phaseolus vulgaris |
Phvul.007G165133 |
PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Chr07 |
+ |
View |
Phaseolus vulgaris |
Phvul.011G074100 |
PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Chr11 |
+ |
View |
Phaseolus vulgaris |
Phvul.001G176200 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Chr01 |
+ |
View |
Phaseolus vulgaris |
Phvul.005G136300 |
PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED |
Chr05 |
- |
View |
Phaseolus vulgaris |
Phvul.007G221400 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
Chr07 |
- |
View |
Quercus lobata |
QL07p044738 |
|
7 |
- |
View |
Quercus lobata |
QL01p022905 |
|
1 |
- |
View |
Rosa chinensis |
RcHm_v2.0_Chr3g0469381 |
|
RcHm_v2.0_Chr3 |
+ |
View |
Rhododendron simsii |
Rhsim05G0183000 |
|
chr05 |
- |
View |
Striga asiatica |
SGA_v2.0_scaffold75G24873 |
|
scaffold75 |
- |
View |
Striga asiatica |
SGA_v2.0_scaffold126G33921 |
|
scaffold126 |
+ |
View |
Salvia bowleyana |
SalBow3G2498 |
|
GWHASIU00000006 |
+ |
View |
Salix brachista |
Sabra16G0094000 |
|
GWHAAZH00000016 |
+ |
View |
Salix brachista |
Sabra06G0101800 |
|
GWHAAZH00000006 |
- |
View |
Simmondsia chinensis |
Sc02g0001870 |
|
GWHAASQ00000002 |
- |
View |
Sechium edule |
Sed0026812 |
|
LG04 |
+ |
View |
Sechium edule |
Sed0012363 |
|
LG02 |
- |
View |
Sechium edule |
Sed0025329 |
|
LG03 |
+ |
View |
Solanum lycopersicum |
Solyc06g075250.3 |
Zinc finger protein JACKDAW (AHRD V3.3 *** A0A1U8HBP2_CAPAN) |
SL4.0ch06 |
- |
View |
Solanum lycopersicum |
Solyc09g007550.3 |
Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2V7B7_CAPBA) |
SL4.0ch09 |
+ |
View |
Solanum lycopersicum |
Solyc10g084180.2 |
Protein indeterminate-domain 2 (AHRD V3.3 *** A0A2G3BGA0_CAPCH) |
SL4.0ch10 |
- |
View |
Schrenkiella parvula |
Sp6g39570 |
PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW |
ch6-6 |
- |
View |
Schrenkiella parvula |
Sp6g22060 |
PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN |
ch6-6 |
+ |
View |
Solanum pennellii |
Sopen10g033630 |
JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect. | JACKDAW (JKD) | FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein |
Spenn-ch10 |
- |
View |
Solanum pennellii |
Sopen09g002420 |
JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect. | JACKDAW (JKD) | FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein |
Spenn-ch09 |
+ |
View |
Solanum tuberosum |
PGSC0003DMG400010478 |
Zinc finger protein JACKDAW |
ST4.03ch10 |
+ |
View |
Solanum tuberosum |
PGSC0003DMG400008110 |
Nucleic acid binding protein |
ST4.03ch11 |
+ |
View |
Solanum tuberosum |
PGSC0003DMG400001747 |
C2H2L domain class transcription factor |
ST4.03ch09 |
- |
View |
Selenicereus undatus |
Hund20205 |
|
Scaffold_33673 |
+ |
View |
Trochodendron aralioides |
TAR623G1421 |
|
group7 |
+ |
View |
Trochodendron aralioides |
TAR636G1842 |
|
group1 |
+ |
View |
Trochodendron aralioides |
TAR633G0506 |
|
group2 |
- |
View |
Trochodendron aralioides |
TAR369G0993 |
|
group18 |
+ |
View |
Theobroma cacao |
Thecc.05G057400 |
C2H2-like zinc finger protein |
Chromosome_5 |
+ |
View |
Theobroma cacao |
Thecc.09G257800 |
Nucleic acid binding protein |
Chromosome_9 |
- |
View |
Tarenaya hassleriana |
THA.LOC104826975 |
zinc finger protein JACKDAW-like isoform X1 |
NW_010967707.1 |
- |
View |
Tarenaya hassleriana |
THA.LOC104816330 |
zinc finger protein JACKDAW-like isoform X1 |
NW_010965775.1 |
+ |
View |
Trifolium pratense |
TPR.G11554 |
|
Tp57577_TGAC_v2_LG7 |
+ |
View |
Trifolium pratense |
TPR.G18262 |
|
Tp57577_TGAC_v2_scaf_359 |
+ |
View |
Tripterygium wilfordii |
TWI53G0612 |
|
NC_052244.1 |
+ |
View |
Tripterygium wilfordii |
TWI74G1120 |
|
NC_052234.1 |
- |
View |
Tripterygium wilfordii |
TWI79G1702 |
|
NC_052238.1 |
+ |
View |
Vaccinium macrocarpon |
vmacro20043 |
Similar to JKD: Zinc finger protein JACKDAW (Arabidopsis thaliana OX%3D3702) |
chr5_Vaccinium_macrocarpon_Stevens_v1 |
- |
View |
Vigna mungo |
VMungo1127G0358 |
|
CM024076.1 |
+ |
View |
Vigna mungo |
VMungo1080G0625 |
|
CM024079.1 |
+ |
View |
Vigna mungo |
VMungo1383G0655 |
|
CM024070.1 |
+ |
View |
Vitis vinifera |
GSVIVG01025166001 |
|
chr6 |
- |
View |
Vitis vinifera |
GSVIVG01025658001 |
|
chr8 |
- |
View |