Gene: AT5G60470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G60470
  • Transcript Identifier AT5G60470.2
  • Gene Type Coding gene
  • Location Chr5 : 24320583-24322790 : positive

Gene Family Information

  • ID HOM05D000179
  • #Genes/#Species 2119/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G60470.2
  • uniprot F4JYZ8

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein
  • Computational description C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G45260.1); Has 38003 Blast hits to 17147 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 35900; Fungi - 231; Plants - 711; Viruses - 1; Other Eukaryotes - 1160 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022755 Zinc finger, double-stranded RNA binding
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)