Gene: COL.COLO4_27043

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27043
  • Transcript Identifier COL.rna25770
  • Gene Type Coding gene
  • Location AWUE01019423.1 : 36841-38462 : negative

Gene Family Information

  • ID HOM05D000179
  • #Genes/#Species 2119/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25770
  • GenBank OMO73528.1
  • id gene27015
  • gene_name COLO4_27043
  • uniprot A0A1R3HT91

Descriptions

  • Description Zinc finger, C2H2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0010075
ISO
PLAZA Integrative Orthologyregulation of meristem growth AT5G03150
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G03150
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT5G03150
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G03150
GO:0008356
ISO
PLAZA Integrative Orthologyasymmetric cell division AT5G03150
GO:0045604
ISO
PLAZA Integrative Orthologyregulation of epidermal cell differentiation AT5G03150
GO:0034504
ISO
PLAZA Integrative Orthologyprotein localization to nucleus AT5G03150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G03150
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G03150
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G03150
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G03150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G03150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033243 Zinc finger protein JACKDAW-like
IPR013087 Zinc finger C2H2-type
IPR036236 Zinc finger C2H2 superfamily
IPR022755 Zinc finger, double-stranded RNA binding
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)