Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020991 PREDICTED: putative lysine-specific demethylase JMJ16 [Nicotiana sylvestris] Contig68 + View
CSS0019027 PREDICTED: putative lysine-specific demethylase JMJ16 [Vitis vinifera] Chr1 + View
CSS0043839 PREDICTED: putative lysine-specific demethylase JMJ16 isoform X3 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G14930 LG-5 + View
Arabidopsis lyrata AL1G19050 scaffold_1 + View
Aquilegia oxysepala Aqoxy5G00216 CHR05 + View
Aquilegia oxysepala Aqoxy2G03663 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LXR25M KOG4541 - Nuclear transport receptor exportin 4 (importin beta superfamily) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I5XT77 PTHR12596:SF1 - EXPORTIN-4 arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G04490 exportin-4 protein unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1)%3B Has 75 Blast hits to 64 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 36%3B Fungi - 0%3B Plants - 22%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G08620 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein PKDM7D%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347)%2C FY-rich%2C C-terminal (InterPro:IPR003889)%2C FY-rich%2C N-terminal (InterPro:IPR003888)%2C Transcription factor jumonji%2C JmjN (InterPro:IPR003349)%2C Zinc finger%2C C5HC2-type (InterPro:IPR004198)%2C FY-rich%2C C-terminal subgroup (InterPro:IPR018516)%2C Transcription factor jumonji (InterPro:IPR013129)%2C FY-rich%2C N-terminal subgroup (InterPro:IPR018518)%3B BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2)%3B Has 2173 Blast hits to 1649 proteins in 190 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 1159%3B Fungi - 446%3B Plants - 392%3B Viruses - 0%3B Other Eukaryotes - 174 (source: NCBI BLink). PKDM7D%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347)%2C FY-rich%2C C-terminal (InterPro:IPR003889)%2C FY-rich%2C N-terminal (InterPro:IPR003888)%2C Transcription factor jumonji%2C JmjN (InterPro:IPR003349)%2C Zinc finger%2C C5HC2-type (InterPro:IPR004198)%2C FY-rich%2C C-terminal subgroup (InterPro:IPR018516)%2C Transcription factor jumonji (InterPro:IPR013129)%2C FY-rich%2C N-terminal subgroup (InterPro:IPR018518)%3B BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). Chr1 + View
Amborella trichopoda ATR0736G175 AmTr_v1.0_scaffold00067 - View
Brassica carinata BcaC05g29938 ChrC05 - View
Brassica carinata BcaC05g30194 ChrC05 - View
Brassica napus A05p42990 A05 - View
Brassica oleracea BolC5t34929H C5 - View
Brassica rapa BraA05t23043Z A05 - View
Capsicum annuum CAN.G1609.14 PGAv.1.6.scaffold1609 - View
Cannabis sativa CANSAT54G2567 NC_044375.1 + View
Corylus avellana Haze_04428 Protein of unknown function 2 + View
Coffea canephora Cc02_g08850 Putative Exportin-4 chr2 + View
Citrus clementina Ciclev10018924m.g scaffold_3 + View
Citrus clementina Ciclev10018568m.g scaffold_3 + View
Carpinus fangiana Cfa006346 Cfa02 - View
Cardamine hirsuta CARHR008530 Lysine-specific demethylase 5A Chr1 + View
Carya illinoinensis CiPaw.03G265700 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr03 - View
Carya illinoinensis CiPaw.04G187500 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr04 - View
Citrullus lanatus ClCG11G010660 Lysine-specific demethylase 5A CG_Chr11 + View
Cucumis melo MELO3C008714.2 Transcription factor jumonji family protein chr05 + View
Chenopodium quinoa AUR62004834 JMJ16: Putative lysine-specific demethylase JMJ16 C_Quinoa_Scaffold_3820 - View
Capsella rubella Carub.0001s0798 scaffold_1 + View
Cucumis sativus L. CsaV3_2G009730 Lysine-specific demethylase chr2 - View
Daucus carota DCAR_018492 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv18443 GWHABJS00000009 - View
Durio zibethinus Duzib106G0267 NW_019168492.1 - View
Durio zibethinus Duzib138G1067 NW_019167893.1 - View
Durio zibethinus Duzib128G0509 NW_019168481.1 - View
Durio zibethinus Duzib177G0982 NW_019168004.1 + View
Eucalyptus grandis Eucgr.H04230 Chr08 + View
Eucalyptus grandis Eucgr.B02147 Chr02 - View
Erythranthe guttata Migut.F00801 scaffold_6 + View
Erythranthe guttata Migut.F01542 scaffold_6 + View
Eutrema salsugineum Thhalv10006592m.g PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED scaffold_5 - View
Fragaria x ananassa FAN02G0354 PF00076//PF02373//PF02375//PF02928//PF05964//PF05965 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // JmjC domain, hydroxylase (JmjC) // jmjN domain (JmjN) // C5HC2 zinc finger (zf-C5HC2) // F/Y-rich N-terminus (FYRN) // F/Y rich C-terminus (FYRC) Fvb6-4 - View
Fragaria x ananassa FAN09G2051 PTHR12596//PTHR12596:SF1 - EXPORTIN 4,7-RELATED // EXPORTIN-4 Fvb6-2 + View
Fragaria x ananassa FAN27G0495 K11446 - histone demethylase JARID1 [EC:1.14.11.-] (JARID1) Fvb2-1 + View
Fragaria x ananassa FAN14G2464 KOG4541 - Nuclear transport receptor exportin 4 (importin beta superfamily) Fvb6-1 + View
Fragaria vesca FvH4_6g01870 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D08G234300 PTHR12596:SF1 - EXPORTIN-4 D08 - View
Gossypium hirsutum Gohir.A11G247600 K11446 - histone demethylase JARID1 [EC:1.14.11.-] (JARID1) A11 + View
Gossypium hirsutum Gohir.A08G217300 PTHR12596:SF1 - EXPORTIN-4 A08 - View
Gossypium hirsutum Gohir.D11G257900 K11446 - histone demethylase JARID1 [EC:1.14.11.-] (JARID1) D11 + View
Gossypium hirsutum Gohir.D13G173000 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED D13 + View
Gossypium hirsutum Gohir.A07G149450 K11446 - histone demethylase JARID1 [EC:1.14.11.-] (JARID1) A07 - View
Gossypium hirsutum Gohir.A13G167600 KOG1246 - DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain A13 + View
Glycine max Glyma.03G251100 PTHR12596:SF1 - EXPORTIN-4 Gm03 - View
Glycine max Glyma.19G248400 PTHR12596:SF1 - EXPORTIN-4 Gm19 - View
Glycine max Glyma.19G165500 K11446 - histone demethylase JARID1 [EC:1.14.11.-] (JARID1) Gm19 - View
Gossypium raimondii Gorai.007G276200 Chr07 + View
Gossypium raimondii Gorai.004G249100 Chr04 - View
Helianthus annuus HanXRQChr14g0455281 Probable JUMONJI 14 HanXRQChr14 - View
Lotus japonicus Lj1g0020261 PTHR12596:SF1 - EXPORTIN-4 chr1 + View
Lonicera japonica Lj2A42T56 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_108161 Lsat_1_v8_lg_2 - View
Malus domestica MD12G1246900 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Chr12 - View
Malus domestica MD04G1229800 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Chr04 - View
Manihot esculenta Manes.08G139400 Chromosome08 - View
Manihot esculenta Manes.09G147900 Chromosome09 + View
Medicago truncatula Medtr7g115710 exportin-4 protein, putative chr7 - View
Nicotiana tabacum Nitab4.5_0003780g0120 JmjC domain, Transcription factor jumonji, JmjN, Zinc finger, C5HC2-type Nitab4.5_0003780 - View
Petunia axillaris Peaxi162Scf00528g00121 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Peaxi162Scf00528 - View
Punica granatum PGR142G3887 NC_045128.1 + View
Punica granatum PGR004G1157 NC_045131.1 - View
Prunus persica Prupe.6G349900 Pp06 - View
Pisum sativum Psat3g006480 CRM1 C terminal chr3LG5 + View
Papaver somniferum PSO063G3989 NC_039364.1 - View
Populus trichocarpa Potri.019G018700 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr19 - View
Populus trichocarpa Potri.013G046700 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Phaseolus vulgaris Phvul.001G161600 Chr01 - View
Phaseolus vulgaris Phvul.006G105600 PTHR12596:SF1 - EXPORTIN-4 Chr06 - View
Quercus lobata QL03p030482 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0449561 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim05G0172700 chr05 + View
Salvia bowleyana SalBow3G0167 GWHASIU00000006 + View
Salix brachista Sabra19G0028500 GWHAAZH00000019 - View
Salix brachista Sabra13G0042700 GWHAAZH00000013 - View
Simmondsia chinensis Sc09g0004230 GWHAASQ00000009 + View
Sechium edule Sed0009230 LG08 + View
Solanum lycopersicum Solyc04g009990.3 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** A0A1P8AMS3_ARATH) SL4.0ch04 - View
Schrenkiella parvula Sp1g07280 PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED ch1-1 + View
Schrenkiella parvula Sp3g03340 PTHR12596:SF1 - EXPORTIN-4 ch3-1 + View
Solanum pennellii Sopen04g005120 PKDM7D | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase , FY-rich, C-terminal , FY-rich, N-terminal , Transcription factor jumonji, JmjN , Zinc finger, C5HC2-type , FY-rich, C-terminal subgroup , Transcription factor jumonji , FY-rich, N-terminal subgroup | BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein . Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400011477 Transcription factor jumonji family protein ST4.03ch04 - View
Trochodendron aralioides TAR365G0120 group16 + View
Trochodendron aralioides TAR362G0314 group17 - View
Trochodendron aralioides TAR636G0200 group1 + View
Theobroma cacao Thecc.05G271000 T27c4.14 protein Chromosome_5 + View
Theobroma cacao Thecc.01G256500 Transcription factor jumonji family protein / zinc finger family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104805780 putative lysine-specific demethylase JMJ16 isoform X2 NW_010961290.1 - View
Trifolium pratense TPR.G6911 Tp57577_TGAC_v2_LG6 - View
Vaccinium macrocarpon vmacro19991 Similar to JMJ16: Putative lysine-specific demethylase JMJ16 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0180 CM024075.1 + View
Vigna mungo VMungo1383G1266 CM024070.1 - View
Vitis vinifera GSVIVG01023517001 chr14 - View