Gene: FAN02G0354
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN02G0354
- Transcript Identifier FAN02G0354.1
- Gene Type Coding gene
- Location Fvb6-4 : 3122089-3137689 : negative
Gene Family Information
- ID HOM05D000329
- #Genes/#Species 1418/100
- Phylogenetic origin
- ID ORTHO05D000833
- #Genes/#Species 589/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb6-4-augustus-gene-31.34.v1.0.a1
- pacid 50519158
Descriptions
- Description PF00076//PF02373//PF02375//PF02928//PF05964//PF05965 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // JmjC domain, hydroxylase (JmjC) // jmjN domain (JmjN) // C5HC2 zinc finger (zf-C5HC2) // F/Y-rich N-terminus (FYRN) // F/Y rich C-terminus (FYRC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034215 | RBM42, RNA recognition motif |
| IPR003888 | FY-rich, N-terminal |
| IPR004198 | Zinc finger, C5HC2-type |
| IPR003349 | JmjN domain |
| IPR003347 | JmjC domain |
| IPR003889 | FY-rich, C-terminal |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 12.3.3.8.4 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7) |