Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020898 uncharacterized protein LOC100305778 [Glycine max] Chr11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10730 LG-11 - View
Acer truncatum Atru.chr5.1354 chr5 + View
Acer truncatum Atru.chr4.2592 chr4 - View
Actinidia chinensis Actinidia24875 Lachesis_group15 - View
Actinidia chinensis Actinidia24317 Lachesis_group24 + View
Arabidopsis lyrata AL3G17050 scaffold_3 - View
Arabidopsis lyrata AL6G30350 scaffold_6 + View
Arabidopsis lyrata AL1G12840 scaffold_1 - View
Amaranthus hybridus Ah.07g204060 AmaHy_arrow1_Scaffold_7 - View
Aquilegia oxysepala Aqoxy2G03235 CHR02 + View
Aquilegia oxysepala Aqoxy5G00540 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A338HQ KOG3448 - Predicted snRNP core protein arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G06190 BTB-POZ and MATH domain 2 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1)%2C AT3G06190 (BPM2)%2C AT2G39760 (BPM3)%2C AT3G03740 (BPM4)%2C AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 2 (BPM2)%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%2C BTB/POZ fold (InterPro:IPR011333)%2C BTB/POZ (InterPro:IPR013069)%2C Kelch related (InterPro:IPR013089)%2C BTB/POZ-like (InterPro:IPR000210)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1)%3B Has 5905 Blast hits to 5761 proteins in 162 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4114%3B Fungi - 49%3B Plants - 1477%3B Viruses - 0%3B Other Eukaryotes - 265 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G03330 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B Has 762 Blast hits to 762 proteins in 209 species: Archae - 2%3B Bacteria - 0%3B Metazoa - 303%3B Fungi - 225%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 135 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G19000 BTB-POZ and MATH domain 1 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1)%2C AT3G06190 (BPM2)%2C AT2G39760 (BPM3)%2C AT3G03740 (BPM4)%2C AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 1 (BPM1)%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%2C BTB/POZ fold (InterPro:IPR011333)%2C BTB/POZ (InterPro:IPR013069)%2C Kelch related (InterPro:IPR013089)%2C BTB/POZ-like (InterPro:IPR000210)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 2 (TAIR:AT3G06190.1)%3B Has 5705 Blast hits to 5596 proteins in 158 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3900%3B Fungi - 59%3B Plants - 1504%3B Viruses - 0%3B Other Eukaryotes - 242 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0626G009 AmTr_v1.0_scaffold00025 - View
Brassica carinata BcaB01g05286 ChrB01 + View
Brassica carinata BcaB08g36629 ChrB08 - View
Brassica carinata BcaC03g13629 ChrC03 + View
Brassica carinata BcaB01g04880 ChrB01 - View
Brassica carinata BcaC04g18629 ChrC04 - View
Brassica carinata BcaB05g23357 ChrB05 + View
Brassica napus A10p20690 A10 - View
Brassica napus C09p57480 C09 - View
Brassica napus A10p01870 A10 - View
Brassica napus C05p61020 C05 - View
Brassica napus C03p10780 C03 + View
Brassica napus A03p09250 A03 + View
Brassica napus A03p34550 A03 + View
Brassica napus C02p10250 C02 + View
Brassica napus C03p42020 C03 + View
Brassica oleracea BolC5t28963H C5 - View
Brassica oleracea BolC3t13551H C3 + View
Brassica oleracea BolC2t06928H C2 + View
Brassica oleracea BolC9t58616H C9 - View
Brassica oleracea BolC3t16483H C3 + View
Brassica rapa BraA10t44132Z A10 - View
Brassica rapa BraA03t10244Z A03 + View
Brassica rapa BraA03t12632Z A03 + View
Beta vulgaris EL10Ac3g06322 K10523 - speckle-type POZ protein (SPOP) Chr3_EL10_PGA_scaffold7 + View
Cannabis sativa CANSAT78G1014 NC_044376.1 - View
Corylus avellana Haze_00979 Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702) 1 - View
Corylus avellana Haze_04755 Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g19800 U6 snRNA-associated Sm-like protein LSm2 chr1 - View
Citrus clementina Ciclev10005094m.g scaffold_9 + View
Citrus clementina Ciclev10023059m.g scaffold_3 - View
Ceratophyllum demersum CDE01G0701 11 - View
Ceratophyllum demersum CDE05G1176 3 + View
Ceratophyllum demersum CDE11G0229 9 + View
Ceratophyllum demersum CDE12G0448 10 - View
Carpinus fangiana Cfa015559 Cfa06 - View
Carpinus fangiana Cfa006100 Cfa02 + View
Cardamine hirsuta CARHR002640 U6 snRNA-associated Sm-like protein LSm2 Chr1 - View
Cardamine hirsuta CARHR194000 BTB/POZ domain containing protein, expressed Chr6 - View
Cardamine hirsuta CARHR080710 BTB/POZ domain containing protein, expressed Chr3 - View
Carya illinoinensis CiPaw.01G158400 K10523 - speckle-type POZ protein (SPOP) Chr01 + View
Carya illinoinensis CiPaw.07G094800 K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Chr07 - View
Citrullus lanatus ClCG05G005490 Speckle-type POZ protein, putative CG_Chr05 - View
Citrullus lanatus ClCG06G005710 Speckle-type POZ protein, putative CG_Chr06 + View
Cucumis melo MELO3C021393.2 BTB-POZ and MATH domain 2 chr11 - View
Cucumis melo MELO3C006573.2 BTB-POZ and MATH domain 2 chr06 - View
Carica papaya Cpa.g.sc16.45 supercontig_16 - View
Chenopodium quinoa AUR62030045 spop: Speckle-type POZ protein C_Quinoa_Scaffold_1447 + View
Capsella rubella Carub.0006s1731 PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED scaffold_6 + View
Capsella rubella Carub.0001s0244 K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) scaffold_1 - View
Capsella rubella Carub.0003s0563 K10523 - speckle-type POZ protein (SPOP) scaffold_3 - View
Cucumis sativus L. CsaV3_3G013800 BTB/POZ and MATH domain-containing protein chr3 - View
Cucumis sativus L. CsaV3_6G005440 BTB/POZ and MATH domain-containing protein chr6 - View
Daucus carota DCAR_030589 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_002421 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv32966 GWHABJS00000010 - View
Davidia involucrata Dinv44471 GWHABJS00000014 - View
Durio zibethinus Duzib151G1100 NW_019167904.1 - View
Durio zibethinus Duzib211G0679 NW_019168049.1 + View
Durio zibethinus Duzib212G0612 NW_019168026.1 - View
Durio zibethinus Duzib138G1757 NW_019167893.1 + View
Durio zibethinus Duzib133G1496 NW_019167938.1 + View
Erigeron canadensis ECA248G1345 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.D00259 scaffold_4 + View
Eutrema salsugineum Thhalv10020850m.g K10523 - speckle-type POZ protein (SPOP) scaffold_13 - View
Eutrema salsugineum Thhalv10009199m.g K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) scaffold_5 + View
Eutrema salsugineum Thhalv10013699m.g K10523 - speckle-type POZ protein (SPOP) scaffold_2 + View
Fragaria x ananassa FAN07G2134 K10523 - speckle-type POZ protein (SPOP) Fvb4-4 + View
Fragaria x ananassa FAN17G1225 KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Fvb4-2 + View
Fragaria x ananassa FAN22G1375 K10523 - speckle-type POZ protein (SPOP) Fvb4-1 - View
Fragaria x ananassa FAN20G2590 K10523 - speckle-type POZ protein (SPOP) Fvb2-3 + View
Fragaria x ananassa FAN27G0978 K10523 - speckle-type POZ protein (SPOP) Fvb2-1 - View
Fragaria x ananassa FAN12G3170 K10523 - speckle-type POZ protein (SPOP) Fvb4-3 - View
Fragaria x ananassa FAN24G2483 K10523 - speckle-type POZ protein (SPOP) Fvb2-2 + View
Fragaria vesca FvH4_2g24040 K10523 - speckle-type POZ protein (SPOP) Fvb2 - View
Fragaria vesca FvH4_4g14240 K10523 - speckle-type POZ protein (SPOP) Fvb4 + View
Gossypium hirsutum Gohir.A08G069900 PTHR13829//PTHR13829:SF2 - SNRNP CORE PROTEIN FAMILY MEMBER // U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2 A08 - View
Gossypium hirsutum Gohir.D11G124900 K10523 - speckle-type POZ protein (SPOP) D11 + View
Glycine max Glyma.10G024300 K10523 - speckle-type POZ protein (SPOP) Gm10 + View
Glycine max Glyma.19G153400 K10523 - speckle-type POZ protein (SPOP) Gm19 + View
Glycine max Glyma.02G149600 K10523 - speckle-type POZ protein (SPOP) Gm02 - View
Glycine max Glyma.03G150800 K10523 - speckle-type POZ protein (SPOP) Gm03 + View
Gossypium raimondii Gorai.004G083500 Chr04 - View
Gossypium raimondii Gorai.007G134100 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0257F.1_g103820 Hma1.2p1_0257F.1 - View
Lotus japonicus Lj5g0001400 K10523 - speckle-type POZ protein (SPOP) chr5 - View
Lonicera japonica Lj2C1179G14 GWHAAZE00000002 - View
Lonicera japonica Lj6C663T23 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_5_187481 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI17_g11989_MAGBIO AED:0.15 Chr17 + View
Malus domestica MD11G1290500 BTB-POZ and MATH domain 2 Chr11 - View
Malus domestica MD13G1181000 BTB-POZ and MATH domain 2 Chr13 + View
Malus domestica MD16G1181700 BTB-POZ and MATH domain 2 Chr16 + View
Malus domestica MD03G1269700 BTB-POZ and MATH domain 2 Chr03 - View
Manihot esculenta Manes.05G073000 Chromosome05 + View
Manihot esculenta Manes.03G186200 Chromosome03 - View
Manihot esculenta Manes.15G021800 Chromosome15 + View
Nelumbo nucifera Nn4g26161 chr4 + View
Nelumbo nucifera Nn1g02137 chr1 + View
Nicotiana tabacum Nitab4.5_0000732g0190 MATH, TRAF-like, BTB/POZ fold, BTB/POZ, BTB/POZ-like Nitab4.5_0000732 - View
Petunia axillaris Peaxi162Scf00095g00912 BTB-POZ and MATH domain 2 Peaxi162Scf00095 + View
Prunus persica Prupe.8G245800 K10523 - speckle-type POZ protein (SPOP) Pp08 - View
Prunus persica Prupe.1G149100 K10523 - speckle-type POZ protein (SPOP) Pp01 + View
Papaver somniferum PSO832G0267 NC_039367.1 + View
Papaver somniferum PSO170G5795 NC_039360.1 - View
Populus trichocarpa Potri.010G029500 PF00651//PF00917 - BTB/POZ domain (BTB) // MATH domain (MATH) Chr10 + View
Populus trichocarpa Potri.008G200700 K10523 - speckle-type POZ protein (SPOP) Chr08 + View
Phaseolus vulgaris Phvul.007G169300 Chr07 + View
Phaseolus vulgaris Phvul.001G148400 K10523 - speckle-type POZ protein (SPOP) Chr01 + View
Quercus lobata QL12p022659 12 - View
Quercus lobata QL06p005850 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0291771 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr4g0418941 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim13G0022300 chr13 + View
Salvia bowleyana SalBow6G0773 GWHASIU00000002 + View
Salix brachista Sabra10G0011700 GWHAAZH00000010 - View
Salix brachista Sabra08G0160500 GWHAAZH00000008 - View
Simmondsia chinensis Sc19g0004620 GWHAASQ00000019 - View
Simmondsia chinensis Sc05g0005070 GWHAASQ00000005 + View
Sechium edule Sed0005585 LG04 + View
Solanum lycopersicum Solyc01g080250.3 BTB/POZ and MATH domain-containing protein 2-like (AHRD V3.3 *** A0A1S3ZJG5_TOBAC) SL4.0ch01 - View
Schrenkiella parvula Sp3g05130 K10523 - speckle-type POZ protein (SPOP) ch3-1 + View
Schrenkiella parvula Sp1g02320 K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) ch1-1 - View
Schrenkiella parvula Sp6g25390 K10523 - speckle-type POZ protein (SPOP) ch6-6 - View
Solanum pennellii Sopen01g032030 BTB-POZ and MATH domain 2 (BPM2) | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH , BTB/POZ fold , BTB/POZ , Kelch related , BTB/POZ-like , TRAF-type | BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 Spenn-ch01 - View
Solanum pennellii Sopen09g028780 Small nuclear ribonucleoprotein family protein | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , U6 snRNA-associated Sm-like protein LSm2 , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400004349 Speckle-type POZ protein ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400003836 Speckle-type POZ protein ST4.03ch09 - View
Selenicereus undatus Hund12211 Scaffold_33679 - View
Trochodendron aralioides TAR362G1116 group17 + View
Trochodendron aralioides TAR365G0146 group16 + View
Theobroma cacao Thecc.04G219600 BTB-POZ and MATH domain 2 Chromosome_4 + View
Theobroma cacao Thecc.01G284300 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104802741 BTB/POZ and MATH domain-containing protein 2 isoform X1 NW_010970490.1 + View
Tarenaya hassleriana THA.LOC104801217 sm-like protein LSM2 NW_010969548.1 + View
Tripterygium wilfordii TWI73G1064 NC_052232.1 - View
Tripterygium wilfordii TWI09G1020 NC_052245.1 + View
Tripterygium wilfordii TWI59G0344 NC_052248.1 + View
Tripterygium wilfordii TWI53G1692 NC_052244.1 + View
Vaccinium macrocarpon vmacro02547 Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0226 CM024070.1 + View
Vigna mungo VMungo0720G2654 CM024071.1 - View
Vitis vinifera GSVIVG01017872001 chr5 + View
Vitis vinifera GSVIVG01011077001 chr7 - View
Zea mays Zm00001eb110590 Zm00001e010888 Orphans transcription factor BTB/POZ and MATH domain-containing protein 2 2 - View