Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4410 LG-10 + View
Aethionema arabicum Aa31LG8G5920 LG-8 - View
Acer truncatum Atru.chr5.2771 chr5 + View
Acer truncatum Atru.chr13.629 chr13 - View
Arabidopsis lyrata AL3G32500 scaffold_3 - View
Arabidopsis lyrata AL1G56970 scaffold_1 - View
Aquilegia oxysepala Aqoxy6G01384 CHR06 + View
Aquilegia oxysepala Aqoxy5G01282 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GH9K5U PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FRV4YZ PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT3G19130 RNA-binding protein 47B RNA-binding protein 47B (RBP47B)%3B FUNCTIONS IN: RNA binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1)%3B Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14%3B Bacteria - 2376%3B Metazoa - 18486%3B Fungi - 4600%3B Plants - 6856%3B Viruses - 8%3B Other Eukaryotes - 5288 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G49600 RNA-binding protein 47A RNA-binding protein 47A (RBP47A)%3B FUNCTIONS IN: RNA binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding protein 47B (TAIR:AT3G19130.1)%3B Has 46260 Blast hits to 24920 proteins in 980 species: Archae - 10%3B Bacteria - 2612%3B Metazoa - 22234%3B Fungi - 5462%3B Plants - 7399%3B Viruses - 56%3B Other Eukaryotes - 8487 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB06g25967 ChrB06 - View
Brassica carinata BcaC01g03648 ChrC01 + View
Brassica carinata BcaB04g19026 ChrB04 - View
Brassica napus A03p41060 A03 - View
Brassica napus A05p30480 A05 + View
Brassica napus C03p50130 C03 - View
Brassica napus C05p46110 C05 + View
Brassica oleracea BolC3t17306H C3 - View
Brassica oleracea BolC1t04457H C1 + View
Brassica rapa BraA05t21888Z A05 + View
Brassica rapa BraA03t13263Z A03 - View
Cicer arietinum L. Ca_18667_v3 Ca_LG6_v3 - View
Coffea canephora Cc10_g03990 Uroporphyrinogen-III synthase, chloroplastic chr10 - View
Coffea canephora Cc02_g18600 Polyadenylate-binding protein RBP47 chr2 - View
Citrus clementina Ciclev10001214m.g scaffold_5 + View
Citrus clementina Ciclev10028454m.g scaffold_8 + View
Carpinus fangiana Cfa018509 Cfa07 - View
Cardamine hirsuta CARHR039650 RNA-binding protein Chr1 - View
Cardamine hirsuta CARHR094540 RNA Binding Protein Chr3 - View
Carya illinoinensis CiPaw.05G053800 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Chr05 + View
Carya illinoinensis CiPaw.06G142400 KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Chr06 - View
Citrullus lanatus ClCG09G017440 RNA-binding protein 47 CG_Chr09 + View
Cucumis melo MELO3C021906.2 polyadenylate-binding protein RBP47 chr11 - View
Corchorus olitorius COL.COLO4_26457 Tetrapyrrole biosynthesis%2C uroporphyrinogen III synthase AWUE01019240.1 - View
Carica papaya Cpa.g.sc62.34 supercontig_62 + View
Capsella rubella Carub.0001s3880 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A scaffold_1 - View
Capsella rubella Carub.0003s1896 scaffold_3 - View
Cucumis sativus L. CsaV3_2G028130 Polyadenylate-binding protein chr2 + View
Cucumis sativus L. CsaV3_2G014110 polyadenylate-binding protein RBP47 chr2 + View
Daucus carota DCAR_001620 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_029026 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_003617 hypothetical protein DCARv2_Chr1 + View
Durio zibethinus Duzib248G1424 NW_019168048.1 + View
Durio zibethinus Duzib132G0303 NW_019167915.1 - View
Erigeron canadensis ECA236G1875 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.G01492 Chr07 + View
Eucalyptus grandis Eucgr.F02370 Chr06 - View
Erythranthe guttata Migut.N01197 scaffold_14 - View
Erythranthe guttata Migut.B00318 scaffold_2 - View
Eutrema salsugineum Thhalv10020763m.g PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A scaffold_13 + View
Eutrema salsugineum Thhalv10011485m.g PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A scaffold_7 + View
Fragaria x ananassa FAN15G0523 KOG0131//KOG0145 - Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) Fvb2-4 + View
Fragaria x ananassa FAN27G2349 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2-1 + View
Fragaria x ananassa FAN24G1497 PTHR24012//PTHR24012:SF403 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2-2 - View
Fragaria x ananassa FAN20G0228 PTHR24012//PTHR24012:SF403 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2-3 - View
Fragaria x ananassa FAN15G2784 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2-4 + View
Fragaria x ananassa FAN20G2490 4.2.1.75 - Uroporphyrinogen-III synthase / Uroporphyrinogen-III cosynthetase Fvb2-3 - View
Fragaria x ananassa FAN27G1876 K01719 - uroporphyrinogen-III synthase (hemD, UROS) Fvb2-1 + View
Fragaria vesca FvH4_2g34870 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2 + View
Fragaria vesca FvH4_2g06660 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Fvb2 + View
Gossypium hirsutum Gohir.D13G037600 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A D13 - View
Gossypium hirsutum Gohir.A13G039100 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A A13 - View
Gossypium hirsutum Gohir.D12G025200 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A D12 + View
Gossypium hirsutum Gohir.A12G025500 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A A12 + View
Glycine max Glyma.06G037300 4.2.1.75 - Uroporphyrinogen-III synthase / Uroporphyrinogen-III cosynthetase Gm06 - View
Glycine max Glyma.07G210800 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Gm07 - View
Glycine max Glyma.04G037000 K01719 - uroporphyrinogen-III synthase (hemD, UROS) Gm04 - View
Glycine max Glyma.17G244800 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Gm17 + View
Gossypium raimondii Gorai.013G042300 Chr13 - View
Gossypium raimondii Gorai.008G025400 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0370F.1_g137970 Hma1.2p1_0370F.1 + View
Lupinus albus Lalb_Chr05g0219041 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0384601 PTHR24012//PTHR24012:SF403 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP47A Lalb_Chr16 - View
Lotus japonicus Lj4g0014396 PTHR24012//PTHR24012:SF403 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP47A chr4 + View
Lonicera japonica Lj9C359T16 GWHAAZE00000009 + View
Lonicera japonica Lj5A207T81 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_7_87360 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_4_124200 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_113180 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI06_g08185_MAGBIO AED:0.40 Chr06 - View
Malus domestica MD05G1076000 RNA-binding protein 47B Chr05 - View
Malus domestica MD10G1090700 RNA-binding protein 47B Chr10 - View
Manihot esculenta Manes.05G170800 Chromosome05 - View
Manihot esculenta Manes.18G034000 Chromosome18 - View
Medicago truncatula Medtr3g101350 uroporphyrinogen III synthase chr3 - View
Medicago truncatula Medtr4g086600 polyadenylate-binding protein RBP47B chr4 + View
Nelumbo nucifera Nn1g05853 chr1 + View
Nelumbo nucifera Nn5g30201 chr5 - View
Nicotiana tabacum Nitab4.5_0002673g0090 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0002673 - View
Petunia axillaris Peaxi162Scf00016g01744 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00016 - View
Punica granatum PGR042G1606 NC_045130.1 - View
Prunus persica Prupe.8G119500 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Pp08 + View
Prunus persica Prupe.1G440700 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Pp01 + View
Pisum sativum Psat7g122000 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr7LG7 - View
Papaver somniferum PSO170G1008 NC_039360.1 - View
Populus trichocarpa Potri.004G143400 KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Chr04 + View
Populus trichocarpa Potri.014G034600 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Chr14 + View
Populus trichocarpa Potri.009G105300 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Chr09 + View
Quercus lobata QL11p037255 11 + View
Quercus lobata QL02p005857 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0307161 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr6g0258701 RcHm_v2.0_Chr6 + View
Striga asiatica SGA_v2.0_scaffold32G13080 scaffold32 + View
Striga asiatica SGA_v2.0_scaffold55G19850 scaffold55 - View
Striga asiatica SGA_v2.0_scaffold13G06583 scaffold13 - View
Salvia bowleyana SalBow6G0939 GWHASIU00000002 - View
Salvia bowleyana SalBow3G0515 GWHASIU00000006 - View
Salix brachista Sabra04G0094900 GWHAAZH00000004 + View
Salix brachista Sabra09G0080400 GWHAAZH00000009 + View
Simmondsia chinensis Sc15g0006360 GWHAASQ00000015 + View
Sechium edule Sed0000341 LG01 - View
Sechium edule Sed0027345 LG05 - View
Solanum lycopersicum Solyc01g108500.4 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) SL4.0ch01 - View
Schrenkiella parvula Sp1g36480 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A ch1-2 - View
Schrenkiella parvula Sp3g17200 PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A ch3-1 - View
Solanum pennellii Sopen01g050710 RNA-binding protein 47B (RBP47B) | FUNCTIONS IN: RNA binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A Spenn-ch01 - View
Solanum pennellii Sopen10g022430 RNA-binding protein 47B (RBP47B) | FUNCTIONS IN: RNA binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400025900 RNA binding protein ST4.03ch01 - View
Trochodendron aralioides TAR625G0340 group4 - View
Trochodendron aralioides TAR381G1672 group11 - View
Trochodendron aralioides TAR628G1719 group5 + View
Trochodendron aralioides TAR376G0108 group14 + View
Theobroma cacao Thecc.02G097900 RNA-binding protein 47A Chromosome_2 - View
Theobroma cacao Thecc.08G013300 RNA-binding protein 47C Chromosome_8 + View
Tripterygium wilfordii TWI79G1195 NC_052238.1 - View
Tripterygium wilfordii TWI31G0079 NC_052233.1 + View
Vaccinium macrocarpon vmacro21557 Similar to UROS: Uroporphyrinogen-III synthase, chloroplastic (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro19488 Similar to RBP47: Polyadenylate-binding protein RBP47 (Nicotiana plumbaginifolia OX%3D4092) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2855 CM024072.1 + View
Vitis vinifera GSVIVG01031780001 chr3 + View
Vitis vinifera GSVIVG01009558001 chr18 + View