Gene: Thecc.02G097900

General Information

Structural Information

Species Theobroma cacao
Gene Identifier Thecc.02G097900
Transcript Identifier Thecc.02G097900.1
Gene Type Coding gene
Location Chromosome_2 : 4999889-5004025 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000561
#Genes/#Species 984/100
Phylogenetic origin

ID ORTHO05D000514
#Genes/#Species 826/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Thecc.02G097900.v2.1
pacid 42031861
ancestorIdentifier Thecc1EG007024.CGDv1.1
ancestorIdentifier Thecc1EG007024t1.CGDv1.1

Descriptions

Short descriptions
Ortholog descriptions

Description RNA-binding protein 47A

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034063	ISO	PLAZA Integrative Orthology	stress granule assembly	AT3G19130

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G19130
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G19130

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010494	ISO	PLAZA Integrative Orthology	cytoplasmic stress granule	AT3G19130
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G19130

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.8.4	RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)