Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001568 PREDICTED: PGR5-like protein 1B, chloroplastic [Nicotiana sylvestris] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G10510 LG-9 + View
Aethionema arabicum Aa31LG6G4960 LG-6 + View
Acer truncatum Atru.chr9.1500 chr9 + View
Actinidia chinensis Actinidia05236 Lachesis_group20 - View
Actinidia chinensis Actinidia27416 Lachesis_group14 + View
Arabidopsis lyrata AL6G46730 scaffold_6 - View
Arabidopsis lyrata AL7G30630 scaffold_7 - View
Avicennia marina MSTRG.13805 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.12034 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.12g057870 PGR5-like protein 1A, chloroplastic (Ferredoxin-plastoquinone reductase 1) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy7G00504 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HFU20B PTHR31032//PTHR31032:SF1//PTHR31867//PTHR31867:SF2 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED // FAMILY NOT NAMED // EXPANSIN-A18-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N69HTX PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RZ3A35 PTHR31032//PTHR31032:SF1//PTHR31867//PTHR31867:SF2 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED // FAMILY NOT NAMED // EXPANSIN-A18-RELATED arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT4G22890 PGR5-LIKE A Encodes PGRL1A%2C a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow%2C similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). PGR5-LIKE A%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: photosynthetic electron transport in photosystem I%2C photosynthesis%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G11960 PGR5-like B Encodes PGRL1B%2C a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow%2C similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). PGR5-like B (PGRL1B)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: photosynthetic electron transport in photosystem I%2C photosynthesis%3B LOCATED IN: chloroplast thylakoid membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: PGR5-LIKE A (TAIR:AT4G22890.2)%3B Has 111 Blast hits to 111 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 101%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung01664 Contig593 - View
Brassica carinata BcaNung01019 Contig421 - View
Brassica carinata BcaC09g51065 ChrC09 - View
Brassica napus A03p53850 A03 + View
Brassica napus C01p17370 C01 + View
Brassica napus A01p14110 A01 + View
Brassica oleracea BolC7t45719H C7 + View
Brassica oleracea BolC1t01675H C1 + View
Brassica rapa BraA03t14454Z A03 + View
Brassica rapa BraA01t01359Z A01 + View
Beta vulgaris EL10Ac5g12684 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G981.62 PGAv.1.6.scaffold981 - View
Capsicum annuum CAN.G1394.10 PGAv.1.6.scaffold1394 - View
Cannabis sativa CANSAT21G0452 NC_044374.1 + View
Corylus avellana Haze_08989 Similar to PGRL1A: PGR5-like protein 1A, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g13730 PGR5-like protein 1A, chloroplastic chr8 + View
Citrus clementina Ciclev10021127m.g scaffold_3 + View
Carpinus fangiana Cfa012069 Cfa05 + View
Cardamine hirsuta CARHR229930 PGR5-LIKE A Chr7 + View
Cardamine hirsuta CARHR254330 PGR5-like B Chr8 + View
Carya illinoinensis CiPaw.12G101000 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr12 - View
Carya illinoinensis CiPaw.11G143200 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr11 - View
Citrullus lanatus ClCG00G000150 PGR5-like protein 1A CG_Chr00 + View
Citrullus lanatus ClCG10G003400 PGR5-like protein 1A CG_Chr10 + View
Cucumis melo MELO3C014009.2 PGR5-like protein 1A, chloroplastic chr06 + View
Corchorus olitorius COL.COLO4_23800 PGR5-like protein 1A%2C chloroplastic-like protein AWUE01018357.1 - View
Carica papaya Cpa.g.sc29.40 supercontig_29 - View
Chenopodium quinoa AUR62010559 PGRL1A: PGR5-like protein 1A, chloroplastic C_Quinoa_Scaffold_1280 + View
Chenopodium quinoa AUR62017330 PGRL1A: PGR5-like protein 1A, chloroplastic C_Quinoa_Scaffold_3489 - View
Capsella rubella Carub.0006s3106 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED scaffold_6 - View
Capsella rubella Carub.0007s1839 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_3G003430 PGR5-like protein 1A, chloroplastic-like protein chr3 + View
Daucus carota DCAR_000890 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv39038 GWHABJS00000003 - View
Davidia involucrata Dinv37708 GWHABJS00000017 - View
Durio zibethinus Duzib205G0169 NW_019168381.1 + View
Durio zibethinus Duzib084G0949 NW_019167827.1 + View
Eucalyptus grandis Eucgr.D01944 Chr04 - View
Erythranthe guttata Migut.A00895 scaffold_1 + View
Erythranthe guttata Migut.E01271 scaffold_5 + View
Eutrema salsugineum Thhalv10025739m.g PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10028695m.g PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED scaffold_3 + View
Fragaria x ananassa FAN18G3786 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Fvb5-1 + View
Fragaria x ananassa FAN13G2490 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Fvb5-2 + View
Fragaria x ananassa FAN04G0845 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Fvb5-4 + View
Fragaria x ananassa FAN08G0919 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Fvb5-3 - View
Fragaria vesca FvH4_5g01180 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Fvb5 + View
Gossypium hirsutum Gohir.A12G223566 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED A12 + View
Gossypium hirsutum Gohir.D08G195200 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED D08 + View
Gossypium hirsutum Gohir.D12G226200 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED D12 + View
Gossypium hirsutum Gohir.A08G176900 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED A08 + View
Glycine max Glyma.05G051300 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Gm05 - View
Glycine max Glyma.01G214300 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Gm01 + View
Glycine max Glyma.17G133200 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Gm17 - View
Gossypium raimondii Gorai.008G242200 Chr08 + View
Gossypium raimondii Gorai.004G206000 Chr04 + View
Hydrangea macrophylla Hma1.2p1_0138F.1_g062780 Hma1.2p1_0138F.1 - View
Lupinus albus Lalb_Chr05g0214701 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Lalb_Chr05 + View
Lotus japonicus Lj2g0000892 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED chr2 - View
Lotus japonicus Lj4g0003870 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED chr4 - View
Lonicera japonica Lj8C243T4 GWHAAZE00000008 - View
Lonicera japonica Lj2A202G55 GWHAAZE00000002 - View
Malus domestica MD04G1071000 PGR5-LIKE A Chr04 - View
Manihot esculenta Manes.01G070000 Chromosome01 - View
Medicago truncatula Medtr5g011220 PGR5-like protein 1A chr5 - View
Medicago truncatula Medtr4g102440 PGR5-like protein 1A chr4 + View
Nelumbo nucifera Nn1g01278 chr1 + View
Nicotiana tabacum Nitab4.5_0002886g0120 Unknown Nitab4.5_0002886 - View
Olea europaea Oeu056817.1 chr8 - View
Petunia axillaris Peaxi162Scf00620g00056 PGR5-LIKE A Peaxi162Scf00620 + View
Petunia axillaris Peaxi162Scf00102g01354 YTH domain-containing protein 2 Peaxi162Scf00102 + View
Punica granatum PGR031G0886 NC_045127.1 + View
Prunus persica Prupe.5G086900 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Pp05 + View
Pisum sativum Psat2g180880 Photosynthetic electron transport in photosystem I chr2LG1 + View
Pisum sativum Psat4g068320 Photosynthetic electron transport in photosystem I chr4LG4 - View
Papaver somniferum PSO782G5713 NC_039365.1 + View
Papaver somniferum PSO478G4698 NC_039361.1 - View
Populus trichocarpa Potri.001G113000 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr01 - View
Populus trichocarpa Potri.003G119200 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr03 + View
Phaseolus vulgaris Phvul.003G213900 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr03 - View
Phaseolus vulgaris Phvul.002G152800 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Chr02 + View
Rosa chinensis RcHm_v2.0_Chr7g0199911 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0096500 chr07 - View
Salvia bowleyana SalBow1G0491 GWHASIU00000001 - View
Salvia bowleyana SalBow6G0972 GWHASIU00000002 - View
Salix brachista Sabra03G0083200 GWHAAZH00000003 + View
Simmondsia chinensis Sc22g0000420 GWHAASQ00000022 - View
Sechium edule Sed0016409 LG03 + View
Solanum lycopersicum Solyc08g080050.4 PGR5-like protein 1A, chloroplastic (AHRD V3.3 *** A0A2G3AE69_CAPAN) SL4.0ch08 + View
Solanum lycopersicum Solyc08g007770.4 PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZ28_9ROSI) SL4.0ch08 + View
Schrenkiella parvula Sp6g05550 PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED ch6-1 + View
Schrenkiella parvula Sp7g20960 PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED ch7-4 + View
Solanum pennellii Sopen08g003700 Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). | PGR5-LIKE A | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: PGR5-like B Spenn-ch08 + View
Solanum pennellii Sopen08g028400 Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). | PGR5-like B (PGRL1B) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis | LOCATED IN: chloroplast thylakoid membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: PGR5-LIKE A . Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400022731 PGR5 1A, chloroplastic ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400012494 PGR5 1A, chloroplastic ST4.03ch08 - View
Selenicereus undatus Hund14702 Scaffold_33677 + View
Trochodendron aralioides TAR629G0773 group0 - View
Theobroma cacao Thecc.03G267900 Pgr5-like a Chromosome_3 + View
Tarenaya hassleriana THA.LOC104814132 PGR5-like protein 1B%2C chloroplastic NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104806356 PGR5-like protein 1B%2C chloroplastic NW_010962392.1 + View
Trifolium pratense TPR.G37646 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI81G0532 NC_052251.1 + View
Tripterygium wilfordii TWI60G0957 NC_052246.1 - View
Vaccinium macrocarpon vmacro14015 Similar to PGRL1A: PGR5-like protein 1A, chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1438 CM024074.1 - View
Vigna mungo VMungo1215G3348 CM024074.1 + View
Vitis vinifera GSVIVG01019890001 chr2 - View