Gene: Sopen08g003700

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g003700
  • Transcript Identifier Sopen08g003700.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 2513384-2515968 : positive

Gene Family Information

  • ID HOM05D003763
  • #Genes/#Species 183/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g003700.1

Descriptions

  • Description Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). | PGR5-LIKE A | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: PGR5-like B
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009773
IEA
InterProphotosynthetic electron transport in photosystem I
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT4G11960

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016730
IEA
InterProoxidoreductase activity, acting on iron-sulfur proteins as donors
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G22890
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G22890
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G22890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
IEA
InterProchloroplast thylakoid membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G22890
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G22890
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT4G22890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039987 PGR5-like protein 1
Mapman id Description
1.1.6.1.2 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5-PGRL1 complex.component PGRL1