Gene: Sopen08g028400
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g028400
- Transcript Identifier Sopen08g028400.1
- Gene Type Coding gene
- Location Spenn-ch08 : 67923819-67927586 : positive
Gene Family Information
- ID HOM05D003763
- #Genes/#Species 183/94
- Phylogenetic origin
- ID ORTHO05D004315
- #Genes/#Species 184/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g028400.1
Descriptions
- Description Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). | PGR5-like B (PGRL1B) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis | LOCATED IN: chloroplast thylakoid membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: PGR5-LIKE A .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009773 | IEA | InterPro | photosynthetic electron transport in photosystem I | |
| GO:0015979 | ISO | PLAZA Integrative Orthology | photosynthesis | AT4G11960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016730 | IEA | InterPro | oxidoreductase activity, acting on iron-sulfur proteins as donors | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G22890 |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT4G22890 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G22890 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009535 | IEA | InterPro | chloroplast thylakoid membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G22890 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT4G22890 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT4G22890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039987 | PGR5-like protein 1 |
| Mapman id | Description |
|---|---|
| 1.1.6.1.2 | Photosynthesis.photophosphorylation.cyclic electron flow.PGR5-PGRL1 complex.component PGRL1 |