Gene: Solyc08g007770.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g007770.4
- Transcript Identifier Solyc08g007770.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 2294032-2296658 : positive
Gene Family Information
- ID HOM05D003763
- #Genes/#Species 183/94
- Phylogenetic origin
- ID ORTHO05D004315
- #Genes/#Species 184/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc08g007770.4.1
- uniprot A0A3Q7IEY2
- gene_id Solyc08g007770
Descriptions
- Description PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZ28_9ROSI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015979 | ISO | PLAZA Integrative Orthology | photosynthesis | AT4G11960 |
| GO:0009773 | IBA IEA | GOA Database | photosynthetic electron transport in photosystem I | |
| GO:0009773 | IEA | InterPro | photosynthetic electron transport in photosystem I | |
| GO:0009664 | IEA | GOA Database | plant-type cell wall organization | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G22890 |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT4G22890 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G22890 |
| GO:0016730 | IBA IEA | GOA Database | oxidoreductase activity, acting on iron-sulfur proteins as donors | |
| GO:0016730 | IEA | InterPro | oxidoreductase activity, acting on iron-sulfur proteins as donors |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT4G22890 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT4G22890 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G22890 |
| GO:0009535 | IBA IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009535 | IEA | InterPro | chloroplast thylakoid membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039987 | PGR5-like protein 1 |
| Mapman id | Description |
|---|---|
| 1.1.6.1.2 | Photosynthesis.photophosphorylation.cyclic electron flow.PGR5-PGRL1 complex.component PGRL1 |