Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011890 PREDICTED: histone H2A [Nelumbo nucifera] Chr4 + View
CSS0010616 putative histone H2A.4 [Morus notabilis] Chr10 + View
CSS0038731 histone H2A12, partial [Gossypium hirsutum] Contig991 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7490 LG-5 + View
Acer truncatum Atru.chr8.1932 chr8 - View
Acer truncatum Atru.chr3.3832 chr3 - View
Actinidia chinensis Actinidia03784 Lachesis_group9 - View
Actinidia chinensis Actinidia13125 Lachesis_group0 + View
Arabidopsis lyrata AL8G36430 scaffold_8 - View
Arabidopsis lyrata AL6G11830 scaffold_6 + View
Avicennia marina MSTRG.19102 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.10271 ScioBoG_13798_HRSCAF_13862 + View
Amaranthus hybridus Ah.08g218970 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy4G02997 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SJW8XV K11251 - histone H2A (H2A) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.674LAM K11251 - histone H2A (H2A) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UK6EYH K11251 - histone H2A (H2A) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QHU61X K11251 - histone H2A (H2A) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT5G02560 histone H2A 12 Encodes HTA12%2C a histone H2A protein. histone H2A 12 (HTA12)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1)%3B Has 3926 Blast hits to 3921 proteins in 369 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2576%3B Fungi - 297%3B Plants - 619%3B Viruses - 2%3B Other Eukaryotes - 432 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G59870 histone H2A 6 Encodes HTA6%2C a histone H2A protein. histone H2A 6 (HTA6)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: histone H2A 12 (TAIR:AT5G02560.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g19644 ChrC04 - View
Brassica carinata BcaB05g22595 ChrB05 - View
Brassica carinata BcaC01g06540 ChrC01 + View
Brassica carinata BcaB08g36213 ChrB08 + View
Brassica napus C09p52390 C09 - View
Brassica napus C02p12050 C02 + View
Brassica napus A03p11430 A03 + View
Brassica napus A02p06760 A02 + View
Brassica oleracea BolC3t13785H C3 + View
Brassica oleracea BolC9t58108H C9 - View
Brassica rapa BraA02t05755Z A02 + View
Brassica rapa BraA10t43793Z A10 - View
Brassica rapa BraA03t10457Z A03 + View
Beta vulgaris EL10Ac7g15973 K11251 - histone H2A (H2A) Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT54G2215 NC_044375.1 + View
Cicer arietinum L. Ca_01339_v3 Ca_LG1_v3 - View
Corylus avellana Haze_20741 Similar to MtrDRAFT_AC149210g1v1: Probable histone H2A.1 (Medicago truncatula OX%3D3880) 10 - View
Corylus avellana Haze_24043 Similar to Histone H2A (Petroselinum crispum OX%3D4043) 6 - View
Coffea canephora Cc01_g12440 Histone H2A chr1 - View
Coffea canephora Cc06_g02980 Histone H2A chr6 + View
Citrus clementina Ciclev10029498m.g scaffold_8 - View
Carpinus fangiana Cfa017430 Cfa07 + View
Cardamine hirsuta CARHR273460 Histone H2A Chr8 - View
Cardamine hirsuta CARHR210800 Histone H2A Chr6 - View
Carya illinoinensis CiPaw.14G071400 KOG1756 - Histone 2A Chr14 + View
Carya illinoinensis CiPaw.13G098100 K11251 - histone H2A (H2A) Chr13 + View
Carya illinoinensis CiPaw.10G143100 K11251 - histone H2A (H2A) Chr10 - View
Citrullus lanatus ClCG04G008410 Histone H2A CG_Chr04 + View
Citrullus lanatus ClCG03G001930 Histone H2A CG_Chr03 + View
Citrullus lanatus ClCG02G020390 Histone H2A CG_Chr02 + View
Cucumis melo MELO3C013682.2 histone H2A chr11 - View
Carica papaya Cpa.g.sc190.23 supercontig_190 + View
Chenopodium quinoa AUR62009615 Os05g0113900: Probable histone H2A.6 C_Quinoa_Scaffold_2493 + View
Chenopodium quinoa AUR62001828 Os05g0113900: Probable histone H2A.6 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0006s0136 K11251 - histone H2A (H2A) scaffold_6 + View
Capsella rubella Carub.0008s2057 K11251 - histone H2A (H2A) scaffold_8 + View
Cucumis sativus L. CsaV3_4G024740 Histone H2A chr4 - View
Cucumis sativus L. CsaV3_6G022220 Histone H2A chr6 - View
Daucus carota DCAR_014835 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_006000 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv35637 GWHABJS00000015 + View
Davidia involucrata Dinv37206 GWHABJS00000021 - View
Durio zibethinus Duzib170G0096 NW_019167871.1 + View
Durio zibethinus Duzib093G0191 NW_019167937.1 - View
Durio zibethinus Duzib150G1462 NW_019167882.1 - View
Durio zibethinus Duzib106G0744 NW_019168492.1 - View
Durio zibethinus Duzib168G0962 NW_019168159.1 + View
Erigeron canadensis ECA236G4090 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA247G0994 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.A01241 Chr01 + View
Eucalyptus grandis Eucgr.K03160 Chr11 + View
Erythranthe guttata Migut.J00363 scaffold_10 + View
Eutrema salsugineum Thhalv10014932m.g K11251 - histone H2A (H2A) scaffold_2 + View
Eutrema salsugineum Thhalv10014920m.g K11251 - histone H2A (H2A) scaffold_2 + View
Fragaria x ananassa FAN16G2072 K11251 - histone H2A (H2A) Fvb3-3 - View
Fragaria x ananassa FAN25G3331 K11251 - histone H2A (H2A) Fvb3-1 - View
Fragaria x ananassa FAN09G4397 K11251 - histone H2A (H2A) Fvb6-2 - View
Fragaria x ananassa FAN21G3698 K11251 - histone H2A (H2A) Fvb3-2 - View
Fragaria x ananassa FAN05G1977 K11251 - histone H2A (H2A) Fvb6-3 - View
Fragaria x ananassa FAN02G1491 K11251 - histone H2A (H2A) Fvb6-4 + View
Fragaria x ananassa FAN11G1102 K11251 - histone H2A (H2A) Fvb3-4 - View
Fragaria vesca FvH4_3g35330 K11251 - histone H2A (H2A) Fvb3 - View
Fragaria vesca FvH4_6g14320 K11251 - histone H2A (H2A) Fvb6 + View
Gossypium hirsutum Gohir.D08G010700 K11251 - histone H2A (H2A) D08 - View
Glycine max Glyma.13G333800 K11251 - histone H2A (H2A) Gm13 - View
Glycine max Glyma.15G040200 K11251 - histone H2A (H2A) Gm15 - View
Helianthus annuus HanXRQChr06g0175791 Putative histone H2A; Histone-fold; Histone H2A, C-terminal domain; Histone H2A conserved site HanXRQChr06 + View
Hydrangea macrophylla Hma1.2p1_0035F.1_g022140 Hma1.2p1_0035F.1 + View
Lupinus albus Lalb_Chr01g0003771 K11251 - histone H2A (H2A) Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0137721 K11251 - histone H2A (H2A) Lalb_Chr19 - View
Lotus japonicus Lj3g0000114 PTHR23430//PTHR23430:SF96 - HISTONE H2A // SUBFAMILY NOT NAMED chr3 - View
Lonicera japonica Lj2C100T3 GWHAAZE00000002 + View
Lonicera japonica Lj1A157T42 GWHAAZE00000001 + View
Lonicera japonica Lj2A1057T50 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_77801 K11251 - histone H2A (H2A) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_5_168621 K11251 - histone H2A (H2A) Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_9_22420 K11251 - histone H2A (H2A) Lsat_1_v8_lg_9 - View
Magnolia biondii MBI14_g07166_MAGBIO AED:0.26 Chr14 - View
Magnolia biondii MBI05_g10358_MAGBIO AED:0.35 Chr05 + View
Malus domestica MD11G1144600 histone H2A 12 Chr11 + View
Malus domestica MD03G1098100 histone H2A 12 Chr03 + View
Malus domestica MD04G1121000 histone H2A 12 Chr04 - View
Malus domestica MD12G1138300 histone H2A 12 Chr12 - View
Manihot esculenta Manes.11G133400 Chromosome11 + View
Manihot esculenta Manes.04G031600 Chromosome04 - View
Medicago truncatula Medtr2g096570 core histone H2A/H2B/H3/H4 chr2 - View
Medicago truncatula Medtr4g063410 core histone H2A/H2B/H3/H4 chr4 - View
Nelumbo nucifera Nn2g10441 chr2 + View
Nelumbo nucifera Nn2g12914 chr2 - View
Nicotiana tabacum Nitab4.5_0000070g0160 Histone-fold, Histone H2A, Histone core Nitab4.5_0000070 - View
Nicotiana tabacum Nitab4.5_0003782g0030 Histone-fold, Histone H2A, Histone core Nitab4.5_0003782 + View
Oryza sativa ssp. japonica Os05g0113900 Similar to Histone H2A. chr05 + View
Oryza sativa ssp. japonica Os03g0279200 Similar to Histone H2A. chr03 - View
Petunia axillaris Peaxi162Scf00039g01221 histone H2A 12 Peaxi162Scf00039 + View
Petunia axillaris Peaxi162Scf00406g00232 histone H2A 12 Peaxi162Scf00406 + View
Punica granatum PGR119G2120 NC_045132.1 + View
Prunus persica Prupe.6G082300 K11251 - histone H2A (H2A) Pp06 + View
Prunus persica Prupe.6G250200 Pp06 - View
Pisum sativum Psat5g283040 Histone H2A signature chr5LG3 - View
Papaver somniferum PSO648G0019 NW_020648748.1 + View
Papaver somniferum PSO384G2143 NC_039368.1 - View
Papaver somniferum PSO339G6734 NC_039366.1 + View
Papaver somniferum PSO339G1734 NC_039366.1 - View
Phaseolus vulgaris Phvul.L003343 K11251 - histone H2A (H2A) scaffold_15 - View
Quercus lobata QL01p033023 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0063441 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim05G0188100 chr05 - View
Rhododendron simsii Rhsim13G0086000 chr13 + View
Striga asiatica SGA_v2.0_scaffold35G14209 scaffold35 - View
Striga asiatica SGA_v2.0_scaffold126G33823 scaffold126 + View
Striga asiatica SGA_v2.0_scaffold94G28618 scaffold94 + View
Salvia bowleyana SalBow3G4403 GWHASIU00000006 - View
Simmondsia chinensis Sc20g0004580 GWHAASQ00000020 - View
Sechium edule Sed0014799 LG01 - View
Sechium edule Sed0023753 LG05 - View
Sapria himalayana SHI05965 scaffold2_22354274 + View
Solanum lycopersicum Solyc11g073250.2 Histone H2A (AHRD V3.3 *** Q9ST30_SOLME) SL4.0ch11 - View
Solanum lycopersicum Solyc09g010400.3 Histone H2A (AHRD V3.3 *** A0A2G2VY95_CAPBA) SL4.0ch09 + View
Schrenkiella parvula Sp6g21570 K11251 - histone H2A (H2A) ch6-6 - View
Solanum pennellii Sopen11g030880 Probable histone H2A.3 - Medicago truncatula (Barrel medic), Encodes HTA12, a histone H2A protein. | histone H2A 12 (HTA12) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2A , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: histone H2A 6 ., Histone-fold Spenn-ch11 - View
Solanum pennellii Sopen09g005140 Probable histone H2A.1 - Medicago truncatula (Barrel medic), Encodes HTA12, a histone H2A protein. | histone H2A 12 (HTA12) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2A , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: histone H2A 6 ., Histone-fold Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400008930 Histone H2A ST4.03ch09 - View
Selenicereus undatus Hund18931 Scaffold_33675 + View
Trochodendron aralioides TAR369G0122 group18 + View
Trochodendron aralioides TAR633G0820 group2 - View
Trochodendron aralioides TAR623G0039 group7 - View
Theobroma cacao Thecc.09G326500 Histone H2A 12 Chromosome_9 + View
Theobroma cacao Thecc.05G044600 Histone H2A 12 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104800645 histone H2A-like NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104826342 histone H2A-like NW_010967707.1 - View
Trifolium pratense TPR.G34329 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI79G0502 NC_052238.1 + View
Tripterygium wilfordii TWI75G1033 NC_052253.1 + View
Tripterygium wilfordii TWI31G0543 NC_052233.1 + View
Vaccinium macrocarpon vmacro20127 Similar to Histone H2A (Petroselinum crispum OX%3D4043) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro03103 Similar to Histone H2A (Petroselinum crispum OX%3D4043) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14510 Similar to At5g02560: Probable histone H2A.4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0382 CM024079.1 - View
Vanilla planifolia HPP92_015401 Histone H2A *** CM028156.1 + View
Vitis vinifera GSVIVG01025019001 chr6 - View
Vitis vinifera GSVIVG01025533001 chr8 - View
Zea mays Zm00001eb266530 Zm00001e029619 Histone H2A 6 - View
Zea mays Zm00001eb397500 Zm00001e038465 Histone H2A 9 + View