Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL6G30160 scaffold_6 - View
Avicennia marina MSTRG.21823 ScioBoG_3008_HRSCAF_3015 - View
Aquilegia oxysepala Aqoxy2G03159_Aqoxy2G03160 CHR02 - View
Aquilegia oxysepala Aqoxy5G00595 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J21882 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E8KUAX PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT5G18810 SC35-like splicing factor 28 encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010%2C 22:2926. SC35-like splicing factor 28 (SCL28)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%3B LOCATED IN: nuclear speck%2C nucleus%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1)%3B Has 26 Blast hits to 26 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 23%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr5 - View
Cannabis sativa CANSAT78G1728 NC_044376.1 + View
Cicer arietinum L. Ca_21557_v3 Ca_LG7_v3 - View
Corylus avellana Haze_01033 Protein of unknown function 1 + View
Coffea canephora Cc03_g02570 Putative uncharacterized protein chr3 - View
Citrus clementina Ciclev10005625m.g scaffold_9 - View
Ceratophyllum demersum CDE11G1051 9 - View
Ceratophyllum demersum CDE05G2235 3 - View
Cardamine hirsuta CARHR194190 Serine/arginine rich splicing factor, putative Chr6 + View
Carya illinoinensis CiPaw.02G088000 KOG0107//KOG0130//KOG4208 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Nucleolar RNA-binding protein NIFK Chr02 - View
Carya illinoinensis CiPaw.01G155400 KOG0130//KOG4207 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Predicted splicing factor, SR protein superfamily Chr01 - View
Citrullus lanatus ClCG05G005700 Serine/arginine rich splicing factor, putative CG_Chr05 + View
Cucumis melo MELO3C006598.2 serine/arginine-rich SC35-like splicing factor SCL28 chr06 + View
Carica papaya Cpa.g.sc16.86 supercontig_16 + View
Capsella rubella Carub.0006s1711 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED scaffold_6 - View
Cucumis sativus L. CsaV3_3G014050 Serine/arginine-rich SC35-like splicing factor chr3 + View
Durio zibethinus Duzib212G0373 NW_019168026.1 - View
Durio zibethinus Duzib151G0792 NW_019167904.1 + View
Erigeron canadensis ECA232G4386 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.G00230 scaffold_7 - View
Erythranthe guttata Migut.N00132 scaffold_14 - View
Eutrema salsugineum Thhalv10015534m.g PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED scaffold_2 - View
Fragaria x ananassa FAN12G2571 PF00076//PF05160 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // DSS1/SEM1 family (DSS1_SEM1) Fvb4-3 + View
Fragaria x ananassa FAN22G0118 KOG0107//KOG0130 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) Fvb4-1 + View
Fragaria x ananassa FAN17G2094 PF00076//PF05160 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // DSS1/SEM1 family (DSS1_SEM1) Fvb4-2 - View
Fragaria x ananassa FAN07G0347 K12900 - FUS-interacting serine-arginine-rich protein 1 (FUSIP1) Fvb4-4 - View
Fragaria vesca FvH4_4g16920 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D10G164700 KOG0114//KOG4207 - Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily D10 + View
Gossypium hirsutum Gohir.A10G103700 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED A10 - View
Glycine max Glyma.07G252700 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Gm07 - View
Glycine max Glyma.17G021700 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Gm17 + View
Gossypium raimondii Gorai.011G183900 Chr11 + View
Hydrangea macrophylla Hma1.2p1_0643F.1_g194620 Hma1.2p1_0643F.1 + View
Lotus japonicus Lj4g0004311 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED chr4 + View
Malus domestica MD16G1177500 SC35-like splicing factor 28 Chr16 - View
Malus domestica MD13G1175700 SC35-like splicing factor 28 Chr13 - View
Manihot esculenta Manes.03G189500 Chromosome03 + View
Medicago truncatula Medtr4g118630 RNA recognition motif, a.k.a. RRM, RBD protein chr4 + View
Nelumbo nucifera Nn4g26085 chr4 - View
Oryza sativa ssp. japonica Os03g0363800 Similar to SC35-like splicing factor SCL28, 28 kD. chr03 + View
Prunus persica Prupe.1G144400 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Pp01 - View
Papaver somniferum PSO170G5418 NC_039360.1 - View
Papaver somniferum PSO832G3799 NC_039367.1 - View
Papaver somniferum PSO302G0119 NW_020624820.1 + View
Populus trichocarpa Potri.008G196700 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Chr08 - View
Populus trichocarpa Potri.010G026100 KOG0130//KOG4207 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Predicted splicing factor, SR protein superfamily Chr10 - View
Phaseolus vulgaris Phvul.003G099500 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL06p006724 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0420501 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0214200 chr04 + View
Salix brachista Sabra08G0163500 GWHAAZH00000008 + View
Salix brachista Sabra10G0013500 GWHAAZH00000010 + View
Sapria himalayana SHI00327 scaffold1_25991295 - View
Solanum lycopersicum Solyc01g080660.3 serine/arginine-rich SC35-like splicing factor SCL28 (AHRD V3.3 *-* A0A2I4G9K3_9ROSI) SL4.0ch01 - View
Schrenkiella parvula Sp6g25570 PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED ch6-6 + View
Solanum tuberosum PGSC0003DMG400006298 Serine/arginine rich splicing factor ST4.03ch01 - View
Trochodendron aralioides TAR362G1256 group17 - View
Theobroma cacao Thecc.04G274400 SC35-like splicing factor 28 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104818835 serine/arginine-rich SC35-like splicing factor SCL28 NW_010966177.1 + View
Trifolium pratense TPR.G14949 Tp57577_TGAC_v2_scaf_591 - View
Tripterygium wilfordii TWI73G0638 NC_052232.1 - View
Tripterygium wilfordii TWI09G1539 NC_052245.1 + View
Vigna mungo VMungo1215G1875 CM024074.1 - View