Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018350 PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X1 [Nelumbo nucifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3600 LG-2 - View
Acer truncatum Atru.chr8.798 chr8 - View
Actinidia chinensis Actinidia17619 Lachesis_group21 + View
Actinidia chinensis Actinidia13688 Lachesis_group10 - View
Actinidia chinensis Actinidia16605 Lachesis_group4 + View
Actinidia chinensis Actinidia26291 Lachesis_group3 + View
Arabidopsis lyrata AL2G25750 scaffold_2 - View
Avicennia marina MSTRG.2942 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.810 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.23825 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.10g037470 Protein CROWDED NUCLEI 1 (Protein KAKU2) (Protein LITTLE NUCLEI 1) AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EMYT0X PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT1G67230 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. LITTLE NUCLEI1 (LINC1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: nucleus organization%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2)%3B Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454%3B Bacteria - 70538%3B Metazoa - 123746%3B Fungi - 25476%3B Plants - 17143%3B Viruses - 1173%3B Other Eukaryotes - 72767 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g15212 ChrB03 - View
Brassica napus A07p35170 A07 - View
Brassica rapa BraA02t06595Z A02 - View
Beta vulgaris EL10Ac2g04618 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G497.7 PGAv.1.6.scaffold497 + View
Cannabis sativa CANSAT64G1104 NC_044379.1 + View
Corylus avellana Haze_14110 Similar to CRWN1: Protein CROWDED NUCLEI 1 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc11_g10760 Putative nuclear matrix constituent protein-related chr11 + View
Coffea canephora Cc07_g05040 Putative nuclear matrix constituent protein 1-like protein chr7 - View
Citrus clementina Ciclev10013467m.g scaffold_6 + View
Citrus clementina Ciclev10030538m.g scaffold_4 + View
Carpinus fangiana Cfa007959 Cfa03 + View
Carya illinoinensis CiPaw.03G005400 KOG0978//KOG4807 - E3 ubiquitin ligase involved in syntaxin degradation // F-actin binding protein, regulates actin cytoskeletal organization Chr03 + View
Citrullus lanatus ClCG11G005290 Nuclear matrix constituent-like protein 1 CG_Chr11 - View
Cucumis melo MELO3C022065.2 Nuclear matrix constituent protein 1 chr09 - View
Carica papaya Cpa.g.sc179.33 supercontig_179 - View
Chenopodium quinoa AUR62008955 CRWN1: Protein CROWDED NUCLEI 1 C_Quinoa_Scaffold_1710 + View
Capsella rubella Carub.0002s1535 KOG0978//KOG0982//KOG4568 - E3 ubiquitin ligase involved in syntaxin degradation // Centrosomal protein Nuf // Cytoskeleton-associated protein and related proteins scaffold_2 - View
Cucumis sativus L. CsaV3_5G039060 protein CROWDED NUCLEI 1 chr5 - View
Daucus carota DCAR_007220 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_010974 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_007520 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv16523 GWHABJS00000008 + View
Davidia involucrata Dinv34858 GWHABJS00000012 + View
Durio zibethinus Duzib251G0529 NW_019167971.1 + View
Durio zibethinus Duzib138G0922 NW_019167893.1 - View
Erigeron canadensis ECA238G3630 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA234G0497 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.J01462 Chr10 - View
Eucalyptus grandis Eucgr.G02361 Chr07 + View
Erythranthe guttata Migut.H00533 scaffold_8 + View
Erythranthe guttata Migut.L01107 scaffold_12 + View
Eutrema salsugineum Thhalv10018034m.g PTHR31908:SF3 - PROTEIN LITTLE NUCLEI1 scaffold_9 - View
Eutrema salsugineum Thhalv10019562m.g PTHR31908:SF4 - F3F19.25 PROTEIN-RELATED scaffold_9 + View
Fragaria x ananassa FAN02G0241 KOG0978//KOG2370 - E3 ubiquitin ligase involved in syntaxin degradation // Cactin Fvb6-4 + View
Fragaria x ananassa FAN14G3399 KOG0978//KOG4809 - E3 ubiquitin ligase involved in syntaxin degradation // Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Fvb6-1 - View
Fragaria x ananassa FAN09G4253 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Fvb6-2 - View
Fragaria x ananassa FAN07G2260 KOG0982 - Centrosomal protein Nuf Fvb4-4 - View
Fragaria x ananassa FAN05G5792 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Fvb6-3 + View
Fragaria x ananassa FAN17G1780 KOG4302//KOG4593 - Microtubule-associated protein essential for anaphase spindle elongation // Mitotic checkpoint protein MAD1 Fvb4-2 - View
Fragaria vesca FvH4_6g45461 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Fvb6 + View
Glycine max Glyma.08G256300 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Gm08 - View
Glycine max Glyma.18G280500 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Gm18 - View
Helianthus annuus HanXRQChr07g0200201 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr07 - View
Hydrangea macrophylla Hma1.2p1_0136F.1_g062050 Hma1.2p1_0136F.1 - View
Lupinus albus Lalb_Chr17g0336541 PTHR31908:SF3 - PROTEIN LITTLE NUCLEI1 Lalb_Chr17 + View
Lupinus albus Lalb_Chr04g0255011 PTHR31908//PTHR31908:SF4 - FAMILY NOT NAMED // F3F19.25 PROTEIN-RELATED Lalb_Chr04 + View
Lotus japonicus Lj1g0026501 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 chr1 + View
Lonicera japonica Lj7A9G80 GWHAAZE00000007 - View
Lonicera japonica Lj6C767T7 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_2_86661 PTHR31908:SF3 - PROTEIN LITTLE NUCLEI1 Lsat_1_v8_lg_2 + View
Malus domestica MD16G1049800 little nuclei1 Chr16 + View
Malus domestica MD09G1082900 little nuclei1 Chr09 - View
Manihot esculenta Manes.01G107600 Chromosome01 - View
Manihot esculenta Manes.06G074000 Chromosome06 + View
Nelumbo nucifera Nn4g23682 chr4 - View
Nelumbo nucifera Nn3g17678 chr3 - View
Olea europaea Oeu061811.2 chr10 - View
Olea europaea Oeu007110.3 scaffold126 - View
Petunia axillaris Peaxi162Scf00479g00119 nuclear matrix constituent protein-related Peaxi162Scf00479 + View
Petunia axillaris Peaxi162Scf01056g00241 nuclear matrix constituent protein-related Peaxi162Scf01056 - View
Punica granatum PGR042G1271 NC_045130.1 + View
Prunus persica Prupe.3G240800 PTHR31908:SF3 - PROTEIN LITTLE NUCLEI1 Pp03 + View
Populus trichocarpa Potri.008G114800 PTHR31908:SF4 - F3F19.25 PROTEIN-RELATED Chr08 - View
Populus trichocarpa Potri.017G111400 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 Chr17 - View
Phaseolus vulgaris Phvul.008G020600 PTHR31908:SF3 - PROTEIN LITTLE NUCLEI1 Chr08 + View
Quercus lobata QL02p053039 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0163401 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0079900 chr08 + View
Striga asiatica SGA_v2.0_scaffold36G14511 scaffold36 - View
Striga asiatica SGA_v2.0_scaffold204G41653 scaffold204 + View
Salvia bowleyana SalBow1G5670 GWHASIU00000001 - View
Salvia bowleyana SalBow1G6161 GWHASIU00000001 - View
Simmondsia chinensis Sc11g0008120 GWHAASQ00000011 - View
Sechium edule Sed0026492 LG03 - View
Sechium edule Sed0011516 LG11 - View
Solanum lycopersicum Solyc02g089800.3 Nuclear matrix constituent-like protein 1 (AHRD V3.3 *** E5GCT1_CUCME) SL4.0ch02 - View
Schrenkiella parvula Sp5g22170 PTHR31908//PTHR31908:SF3 - FAMILY NOT NAMED // PROTEIN LITTLE NUCLEI1 ch5-6 - View
Solanum pennellii Sopen02g034490 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. | LITTLE NUCLEI1 (LINC1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: nucleus organization | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related Spenn-ch02 - View
Solanum pennellii Sopen03g009490 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. | LITTLE NUCLEI1 (LINC1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: nucleus organization | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG402010047 DNA double-strand break repair rad50 ATPase ST4.03ch02 + View
Selenicereus undatus Hund05774 Scaffold_19641 + View
Selenicereus undatus Hund13740 Scaffold_33679 + View
Trochodendron aralioides TAR629G0360 group0 - View
Trochodendron aralioides TAR622G0904 group8 + View
Trochodendron aralioides TAR371G0717 group13 + View
Theobroma cacao Thecc.04G140200 Nuclear matrix constituent protein 1-like protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104822178 protein CROWDED NUCLEI 3 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104805555 protein CROWDED NUCLEI 1-like NW_010961290.1 + View
Tripterygium wilfordii TWI79G1631 NC_052238.1 + View
Tripterygium wilfordii TWI31G1272 NC_052233.1 + View
Utricularia gibba unitig_899.g15128 unitig_899 - View
Vaccinium macrocarpon vmacro18103 Similar to CRWN1: Protein CROWDED NUCLEI 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0213 CM024070.1 + View