Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016923 hypothetical protein CICLE_v10005640mg [Citrus clementina] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10970 LG-11 - View
Acer truncatum Atru.chr4.2762 chr4 - View
Acer truncatum Atru.chr5.1260 chr5 + View
Actinidia chinensis Actinidia23421 Lachesis_group3 + View
Arabidopsis lyrata AL6G29920 scaffold_6 + View
Arabidopsis lyrata AL5G45750 scaffold_5 + View
Aquilegia oxysepala Aqoxy5G00648 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0UW0EU PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WY5R7K K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JX4TU4 PF00097//PF05495//PF13923 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // CHY zinc finger (zf-CHY) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NJI399 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein Encodes a RING-type E3 ubiquitin ligase that interacts with and ubiquitinates MYB30%2C leads to MYB30 proteasomal degradation and downregulation of its transcriptional activity. Since MYB30 is a positive regulator of Arabidopsis HR and defence responses%2C MIEL1 is involved in the negative regulation of these processes. CHY-type/CTCHY-type/RING-type Zinc finger protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CTCHY-type (InterPro:IPR017921)%2C Zinc finger%2C CHY-type (InterPro:IPR008913)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G62970.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0706G119 AmTr_v1.0_scaffold00057 + View
Brassica carinata BcaB08g36655 ChrB08 - View
Brassica carinata BcaC04g18658 ChrC04 - View
Brassica carinata BcaC03g13615 ChrC03 + View
Brassica napus A03p09000 A03 + View
Brassica napus C02p10120 C02 + View
Brassica napus A02p05070 A02 + View
Brassica oleracea BolC3t13527H C3 + View
Brassica oleracea BolC9t58651H C9 - View
Brassica rapa BraA10t44157Z A10 - View
Cannabis sativa CANSAT78G0879 NC_044376.1 + View
Cicer arietinum L. Ca_00567_v3 Ca_LG1_v3 + View
Corylus avellana Haze_01254 Similar to MIEL1: E3 ubiquitin-protein ligase MIEL1 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_04832 Similar to MIEL1: E3 ubiquitin-protein ligase MIEL1 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc03_g02250 Putative RING finger and CHY zinc finger domain-containing protein 1 chr3 + View
Coffea canephora Cc01_g20350 Putative RING finger and CHY zinc finger domain-containing protein 1 chr1 - View
Citrus clementina Ciclev10005640m.g scaffold_9 - View
Cardamine hirsuta CARHR194350 RING finger and CHY zinc finger domain-containing protein Chr6 - View
Carya illinoinensis CiPaw.07G101300 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Chr07 - View
Carya illinoinensis CiPaw.02G085900 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Chr02 + View
Carya illinoinensis CiPaw.01G152400 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Chr01 + View
Citrullus lanatus ClCG09G006400 CHY zinc finger family protein, expressed CG_Chr09 + View
Citrullus lanatus ClCG05G005870 CHY zinc finger family protein, expressed CG_Chr05 - View
Cucumis melo MELO3C006615.2 RING finger and CHY zinc finger protein chr06 - View
Cucumis melo MELO3C015902.2 CHY zinc finger family protein, expressed chr01 - View
Corchorus olitorius COL.COLO4_13919 Zinc finger%2C RING-type AWUE01015337.1 + View
Carica papaya Cpa.g.sc16.126 supercontig_16 - View
Capsella rubella Carub.0006s1694 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED scaffold_6 + View
Cucumis sativus L. CsaV3_7G028740 RING finger and CHY zinc finger domain-containing protein 1 chr7 - View
Cucumis sativus L. CsaV3_3G014220 RING finger and CHY zinc finger domain-containing protein 1 chr3 - View
Daucus carota DCAR_002449 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_002792 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv33003 GWHABJS00000010 + View
Davidia involucrata Dinv38318 GWHABJS00000016 - View
Davidia involucrata Dinv44419 GWHABJS00000014 - View
Durio zibethinus Duzib138G0647 NW_019167893.1 + View
Durio zibethinus Duzib151G0551 NW_019167904.1 - View
Erigeron canadensis ECA240G2064 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.B01270 Chr02 - View
Eucalyptus grandis Eucgr.H01203 Chr08 + View
Erythranthe guttata Migut.G00199 scaffold_7 + View
Eutrema salsugineum Thhalv10014400m.g PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria x ananassa FAN24G1101 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Fvb2-2 + View
Fragaria x ananassa FAN12G2397 K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2) Fvb4-3 + View
Fragaria x ananassa FAN20G1960 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Fvb2-3 + View
Fragaria x ananassa FAN27G2130 PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Fvb2-1 - View
Fragaria x ananassa FAN22G1179 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Fvb4-1 - View
Fragaria vesca FvH4_4g17350 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Fvb4 - View
Fragaria vesca FvH4_2g24920 PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Fvb2 - View
Gossypium hirsutum Gohir.D10G167200 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.D02G052300 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED D02 - View
Gossypium hirsutum Gohir.A10G101055 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED A10 + View
Gossypium hirsutum Gohir.A02G046600 PF05495//PF13923//PF14599 - CHY zinc finger (zf-CHY) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) // Zinc-ribbon (zinc_ribbon_6) A02 - View
Glycine max Glyma.17G023400 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Gm17 - View
Glycine max Glyma.07G250900 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Gm07 + View
Glycine max Glyma.03G209900 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Gm03 - View
Glycine max Glyma.13G215600 PF00097//PF05495//PF14599 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // CHY zinc finger (zf-CHY) // Zinc-ribbon (zinc_ribbon_6) Gm13 - View
Glycine max Glyma.15G097300 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Gm15 + View
Gossypium raimondii Gorai.011G186700 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0823F.1_g224710 Hma1.2p1_0823F.1 - View
Lupinus albus Lalb_Chr18g0047411 PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Lalb_Chr18 + View
Lupinus albus Lalb_Chr20g0118091 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Lalb_Chr20 + View
Lupinus albus Lalb_Chr12g0196471 PF05495//PF13923//PF14599 - CHY zinc finger (zf-CHY) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) // Zinc-ribbon (zinc_ribbon_6) Lalb_Chr12 - View
Lupinus albus Lalb_Chr18g0055691 PF00097//PF05495//PF14599 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // CHY zinc finger (zf-CHY) // Zinc-ribbon (zinc_ribbon_6) Lalb_Chr18 + View
Lotus japonicus LjContig00389g0001246 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Contig00389 - View
Lonicera japonica Lj6C670T24 GWHAAZE00000006 - View
Malus domestica MD13G1172900 CHY-type/CTCHY-type/RING-type Zinc finger protein Chr13 + View
Malus domestica MD16G1174300 CHY-type/CTCHY-type/RING-type Zinc finger protein Chr16 + View
Manihot esculenta Manes.03G191600 Chromosome03 - View
Manihot esculenta Manes.15G016100 Chromosome15 + View
Medicago truncatula Medtr2g020040 CHY and CTCHY and RING-type zinc finger protein chr2 + View
Nelumbo nucifera Nn4g25982 chr4 + View
Nicotiana tabacum Nitab4.5_0000829g0100 Zinc finger, RING-type, Zinc finger, CHY-type, Zinc finger, CTCHY-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, C3HC4 RING-type Nitab4.5_0000829 - View
Nicotiana tabacum Nitab4.5_0001459g0130 Zinc finger, RING-type, Rubredoxin-type fold, Zinc finger, RING/FYVE/PHD-type, Zinc finger, CTCHY-type Nitab4.5_0001459 + View
Nicotiana tabacum Nitab4.5_0002986g0020 Zinc finger, C3HC4 RING-type, Zinc finger, CHY-type, Rubredoxin-type fold, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, Zinc finger, CTCHY-type Nitab4.5_0002986 + View
Olea europaea Oeu062893.1 scaffold920 - View
Olea europaea Oeu044783.1 chr22 + View
Petunia axillaris Peaxi162Scf00386g00919 CHY-type/CTCHY-type/RING-type Zinc finger protein Peaxi162Scf00386 + View
Petunia axillaris Peaxi162Scf00033g01411 CHY-type/CTCHY-type/RING-type Zinc finger protein Peaxi162Scf00033 + View
Punica granatum PGR031G0221 NC_045127.1 - View
Punica granatum PGR119G2149 NC_045132.1 + View
Prunus persica Prupe.8G254000 PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Pp08 - View
Prunus persica Prupe.1G141000 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Pp01 + View
Pisum sativum Psat1g187400 Zinc-ribbon chr1LG6 - View
Papaver somniferum PSO210G6506 NC_039359.1 + View
Papaver somniferum PSO170G6272 NC_039360.1 - View
Papaver somniferum PSO210G4862 NC_039359.1 - View
Populus trichocarpa Potri.014G134400 PTHR21319//PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Chr14 + View
Populus trichocarpa Potri.008G205400 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.003G101500 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.006G162000 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED Chr06 - View
Quercus lobata QL06p007577 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0292841 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr4g0421291 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0217300 chr04 - View
Striga asiatica SGA_v2.0_scaffold1G00416 scaffold1 + View
Salvia bowleyana SalBow2G0530 GWHASIU00000007 - View
Salix brachista Sabra14G0100200 GWHAAZH00000014 + View
Salix brachista Sabra08G0156500 GWHAAZH00000008 + View
Simmondsia chinensis Sc19g0004970 GWHAASQ00000019 - View
Sechium edule Sed0020744 LG02 + View
Sechium edule Sed0009020 LG12 + View
Solanum lycopersicum Solyc01g067360.3 E3 ubiquitin-protein ligase MIEL1-like (AHRD V3.3 *** A0A1S4C6Z0_TOBAC) SL4.0ch01 - View
Solanum lycopersicum Solyc06g054540.3 E3 ubiquitin-protein ligase MIEL1-like (AHRD V3.3 *** A0A1S4BAM5_TOBAC) SL4.0ch06 - View
Schrenkiella parvula Sp6g25690 PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED ch6-6 - View
Solanum pennellii Sopen06g019610 CHY-type/CTCHY-type/RING-type Zinc finger protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type , Zinc finger, CHY-type , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030762 Zinc finger family protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400022656 Zinc finger family protein ST4.03ch01 - View
Selenicereus undatus Hund20590 Scaffold_33673 - View
Theobroma cacao Thecc.04G278700 CHY-type/CTCHY-type/RING-type Zinc finger protein Chromosome_4 - View
Theobroma cacao Thecc.01G292200 Zinc finger (C3HC4-type RING finger) family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104827119 E3 ubiquitin-protein ligase MIEL1-like isoform X1 NW_010967707.1 + View
Trifolium pratense TPR.G1516 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI73G0109 NC_052232.1 + View
Tripterygium wilfordii TWI53G0325 NC_052244.1 - View
Utricularia gibba unitig_748.g8373 unitig_748 - View
Vaccinium macrocarpon vmacro02500 Similar to MIEL1: E3 ubiquitin-protein ligase MIEL1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1656 CM024075.1 + View
Vigna mungo VMungo1215G3376 CM024074.1 + View
Vitis vinifera GSVIVG01010990001 chr7 - View
Vitis vinifera GSVIVG01017793001 chr5 + View