Gene: FAN12G2397
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN12G2397
- Transcript Identifier FAN12G2397.1
- Gene Type Coding gene
- Location Fvb4-3 : 14308177-14310661 : positive
Gene Family Information
- ID HOM05D000548
- #Genes/#Species 997/100
- Phylogenetic origin
- ID ORTHO05D000987
- #Genes/#Species 528/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb4-3-snap-gene-143.43.v1.0.a1
- pacid 50473258
Descriptions
- Description K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1901485 | ISO | PLAZA Integrative Orthology | positive regulation of transcription factor catabolic process | AT5G18650 |
| GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT5G18650 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT5G18650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT5G18650 |
| GO:0008134 | ISO | PLAZA Integrative Orthology | transcription factor binding | AT5G18650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G18650 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G18650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |