Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC09g48809 ChrC09 + View
BcaB04g20773 ChrB04 + View
BcaC05g28608 ChrC05 - View
BcaC01g03696 ChrC01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G5390 LG-8 + View
Actinidia chinensis Actinidia31025 Lachesis_group1 - View
Arabidopsis lyrata AL3G31840 scaffold_3 + View
Arabidopsis thaliana AT3G18520 histone deacetylase 15 Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. histone deacetylase 15 (HDA15)%3B FUNCTIONS IN: histone deacetylase activity%3B INVOLVED IN: DNA mediated transformation%2C histone deacetylation%3B LOCATED IN: intracellular%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RanBP2-type (InterPro:IPR001876)%2C Histone deacetylase superfamily (InterPro:IPR000286)%3B BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1)%3B Has 9240 Blast hits to 9035 proteins in 1456 species: Archae - 223%3B Bacteria - 3186%3B Metazoa - 1508%3B Fungi - 639%3B Plants - 555%3B Viruses - 0%3B Other Eukaryotes - 3129 (source: NCBI BLink). Chr3 + View
Brassica napus C03p49480 C03 + View
Brassica napus A03p40690 A03 + View
Brassica napus C05p47100 C05 - View
Brassica napus A05p31110 A05 - View
Brassica napus C01p45690 C01 - View
Brassica oleracea BolC1t04531H C1 - View
Brassica oleracea BolC5t33436H C5 - View
Brassica oleracea BolC3t17246H C3 + View
Brassica rapa BraA01t03669Z A01 - View
Brassica rapa BraA05t21952Z A05 - View
Brassica rapa BraA03t13225Z A03 + View
Beta vulgaris EL10Ac6g15291 PTHR10625//PTHR10625:SF104 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 6 Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0027606 PREDICTED: histone deacetylase 15 isoform X2 [Vitis vinifera] Chr15 - View
Capsicum annuum CAN.G438.119 PGAv.1.6.scaffold438 - View
Corylus avellana Haze_18621 Similar to HDA15: Histone deacetylase 15 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc04_g07470 Histone deacetylase 15 chr4 + View
Citrus clementina Ciclev10019370m.g scaffold_3 - View
Carpinus fangiana Cfa019809 Cfa08 + View
Cardamine hirsuta CARHR093900 Histone deacetylase 15 Chr3 + View
Carya illinoinensis CiPaw.15G127300 PTHR10625:SF120 - HISTONE DEACETYLASE 15 Chr15 - View
Citrullus lanatus ClCG01G015340 Histone deacetylase, putative CG_Chr01 - View
Cucumis melo MELO3C008064.2 Histone deacetylase, putative chr08 + View
Carica papaya Cpa.g.sc13.45 supercontig_13 + View
Chenopodium quinoa AUR62032194 HDA15: Histone deacetylase 15 C_Quinoa_Scaffold_1177 - View
Chenopodium quinoa AUR62003584 HDA14: Histone deacetylase 14 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0003s1831 PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 scaffold_3 + View
Cucumis sativus L. CsaV3_6G041560 Histone deacetylase chr6 - View
Daucus carota DCAR_023185 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv40429 GWHABJS00000006 + View
Eucalyptus grandis Eucgr.B00702 Chr02 - View
Eutrema salsugineum Thhalv10020421m.g PTHR10625:SF120 - HISTONE DEACETYLASE 15 scaffold_13 - View
Fragaria x ananassa FAN13G1473 K11407 - histone deacetylase 6 (HDAC6) Fvb5-2 + View
Fragaria x ananassa FAN18G3757 K11407 - histone deacetylase 6 (HDAC6) Fvb5-1 + View
Fragaria x ananassa FAN18G2590 K11407 - histone deacetylase 6 (HDAC6) Fvb5-1 + View
Fragaria x ananassa FAN04G2323 K11407 - histone deacetylase 6 (HDAC6) Fvb5-4 + View
Fragaria x ananassa FAN08G3403 PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 Fvb5-3 - View
Fragaria vesca FvH4_5g12660 PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 Fvb5 + View
Gossypium hirsutum Gohir.A05G383400 PTHR10625//PTHR10625:SF104 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 6 A05 + View
Gossypium hirsutum Gohir.D12G265800 PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 D12 - View
Glycine max Glyma.05G012850 PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 Gm05 + View
Gossypium raimondii Gorai.008G285500 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0340F.1_g129850 Hma1.2p1_0340F.1 + View
Lotus japonicus Lj4g0005909 3.5.1.98 - Histone deacetylase / HDAC chr4 + View
Lotus japonicus Lj4g0008764 PTHR10625:SF120 - HISTONE DEACETYLASE 15 chr4 + View
Lonicera japonica Lj5A145G38 GWHAAZE00000005 - View
Malus domestica MD14G1222300 histone deacetylase 15 Chr14 - View
Malus domestica MD06G1211800 histone deacetylase 15 Chr06 - View
Manihot esculenta Manes.01G020400 Chromosome01 + View
Medicago truncatula Medtr4g111985 histone deacetylase superfamily protein chr4 - View
Nicotiana tabacum Nitab4.5_0001599g0120 Histone deacetylase domain, Histone deacetylase superfamily, Zinc finger, RanBP2-type Nitab4.5_0001599 + View
Nicotiana tabacum Nitab4.5_0000410g0030 Histone deacetylase superfamily, Zinc finger, RanBP2-type, Histone deacetylase domain Nitab4.5_0000410 + View
Petunia axillaris Peaxi162Scf00015g00729 histone deacetylase 15 Peaxi162Scf00015 - View
Punica granatum PGR083G1355 NC_045133.1 - View
Rosa chinensis RcHm_v2.0_Chr7g0184671 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0136600 chr08 + View
Salix brachista Sabra12G0043500 GWHAAZH00000012 - View
Simmondsia chinensis Sc10g0009540 GWHAASQ00000010 + View
Solanum lycopersicum Solyc03g119730.3 Histone deacetylase (AHRD V3.3 *** A0A2G3A3A8_CAPAN) SL4.0ch03 + View
Schrenkiella parvula Sp3g16610 PTHR10625:SF120 - HISTONE DEACETYLASE 15 ch3-1 + View
Solanum pennellii Sopen03g038580 Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. | histone deacetylase 15 (HDA15) | FUNCTIONS IN: histone deacetylase activity | INVOLVED IN: DNA mediated transformation, histone deacetylation | LOCATED IN: intracellular | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type , Histone deacetylase superfamily | BEST Arabidopsis thaliana protein match is: histone deacetylase 5 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400005706 Histone deacetylase hda1 ST4.03ch03 + View
Trochodendron aralioides TAR622G0805 group8 + View
Theobroma cacao Thecc.03G028900 Histone deacetylase 15 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104820404 histone deacetylase 15 NW_010966178.1 + View
Tripterygium wilfordii TWI81G0178 NC_052251.1 + View
Tripterygium wilfordii TWI79G0588 NC_052238.1 + View
Vaccinium macrocarpon vmacro17672 Similar to HDA15: Histone deacetylase 15 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0496 CM024069.1 - View
Vitis vinifera GSVIVG01008242001 chr17 + View