Gene: BraA03t13225Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA03t13225Z
- Transcript Identifier BraA03t13225Z
- Gene Type Coding gene
- Location A03 : 18461588-18464069 : positive
Gene Family Information
- ID HOM05D001053
- #Genes/#Species 576/99
- Phylogenetic origin
- ID ORTHO05D007087
- #Genes/#Species 134/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P5ZP15
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009789 | ISO | PLAZA Integrative Orthology | positive regulation of abscisic acid-activated signaling pathway | AT3G18520 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT3G18520 |
| GO:0051289 | ISO | PLAZA Integrative Orthology | protein homotetramerization | AT3G18520 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G18520 |
| GO:2000306 | ISO | PLAZA Integrative Orthology | positive regulation of photomorphogenesis | AT3G18520 |
| GO:0070932 | IEA | GOA Database | histone H3 deacetylation | |
| GO:0042548 | ISO | PLAZA Integrative Orthology | regulation of photosynthesis, light reaction | AT3G18520 |
| GO:0009294 | ISO | PLAZA Integrative Orthology | DNA mediated transformation | AT3G18520 |
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0016575 | IEA | GOA Database | histone deacetylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G18520 |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT3G18520 |
| GO:0032041 | IEA | GOA Database | NAD-dependent histone deacetylase activity (H3-K14 specific) | |
| GO:0004407 | IEA | GOA Database | histone deacetylase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G18520 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G18520 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G18520 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |