Gene: PGR083G1355

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G1355
  • Transcript Identifier PGR083G1355.07
  • Gene Type Coding gene
  • Location NC_045133.1 : 2701261-2707048 : negative

Gene Family Information

  • ID HOM05D001053
  • #Genes/#Species 576/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031404329.1
  • name LOC116213494
  • name XM_031548469.1
  • id gene-LOC116213494
  • uniprot A0A6P8EFZ3

Descriptions

  • product histone deacetylase 15, transcript variant X7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT3G18520
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT3G18520
GO:0051289
ISO
PLAZA Integrative Orthologyprotein homotetramerization AT3G18520
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G18520
GO:2000306
ISO
PLAZA Integrative Orthologypositive regulation of photomorphogenesis AT3G18520
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0042548
ISO
PLAZA Integrative Orthologyregulation of photosynthesis, light reaction AT3G18520
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT3G18520
GO:0006325
IEA
GOA Databasechromatin organization
GO:0016575
IEA
GOA Databasehistone deacetylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT3G18520
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18520
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0004407
IEA
GOA Databasehistone deacetylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G18520
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G18520
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G18520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023696 Ureohydrolase domain superfamily
IPR037138 Histone deacetylase domain superfamily
IPR023801 Histone deacetylase domain
IPR000286 Histone deacetylase family
Mapman id Description
12.3.2.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase