Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB03g15973 ChrB03 + View
BcaC05g26146 ChrC05 + View
BcaC08g47381 ChrC08 + View
BcaB02g07143 ChrB02 + View
BcaC08g45439 ChrC08 - View
BcaB07g32238 ChrB07 + View
BcaC03g15788 ChrC03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G6150 LG-7 + View
Aethionema arabicum Aa31LG4G8120 LG-4 + View
Acer truncatum Atru.chr13.1231 chr13 - View
Acer truncatum Atru.chr4.125 chr4 - View
Actinidia chinensis Actinidia10308 Lachesis_group26 - View
Arabidopsis lyrata AL2G38380 scaffold_2 + View
Arabidopsis lyrata AL1G35640 scaffold_1 + View
Avicennia marina MSTRG.24470 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.2559 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.22142 ScioBoG_3008_HRSCAF_3015 + View
Amaranthus hybridus Ah.05g170270 Ethylene-responsive transcription factor RAP2-4 (Ethylene-responsive transcription factor ERF059) (Protein RELATED TO APETALA2 4) AmaHy_arrow1_Scaffold_5 - View
Arabidopsis thaliana AT1G22190 Integrase-type DNA-binding superfamily protein The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1)%3B Has 5992 Blast hits to 5760 proteins in 260 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5935%3B Viruses - 12%3B Other Eukaryotes - 35 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G78080 related to AP2 4 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. related to AP2 4 (RAP2.4)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1)%3B Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5806%3B Viruses - 11%3B Other Eukaryotes - 26 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0564G067 AmTr_v1.0_scaffold00010 - View
Brassica napus C05p21310 C05 + View
Brassica napus C06p30690 C06 - View
Brassica napus A02p21960 A02 + View
Brassica napus C02p35300 C02 + View
Brassica napus C06p52030 C06 + View
Brassica napus A07p43310 A07 + View
Brassica napus A07p27710 A07 - View
Brassica oleracea BolC7t42694H C7 - View
Brassica oleracea BolC2t09547H C2 + View
Brassica oleracea BolC5t30829H C5 + View
Brassica oleracea BolC6t38233H C6 - View
Brassica oleracea BolC6t40226H C6 + View
Brassica rapa BraA02t07201Z A02 + View
Brassica rapa BraA07t31852Z A07 + View
Brassica rapa BraA09t39733Z A09 - View
Brassica rapa BraA07t30413Z A07 - View
Beta vulgaris EL10Ac1g01253 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0008562 unnamed protein product [Coffea canephora] Chr1 - View
Camellia sinensis var. sinensis CSS0038555 ethylene-responsive element binding-factor [Jatropha curcas] Chr4 - View
Camellia sinensis var. sinensis CSS0022907 hypothetical protein POPTR_0005s16690g [Populus trichocarpa] Chr9 + View
Cicer arietinum L. Ca_15237_v3 Ca_LG5_v3 + View
Corylus avellana Haze_00582 Similar to RAP2-4: Ethylene-responsive transcription factor RAP2-4 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc10_g07460 Ethylene-responsive transcription factor RAP2-4 chr10 - View
Coffea canephora Cc07_g15390 Putative Ethylene-responsive transcription factor RAP2-4 chr7 - View
Citrus clementina Ciclev10001563m.g scaffold_5 - View
Citrus clementina Ciclev10025961m.g scaffold_7 + View
Cardamine hirsuta CARHR071540 Ethylene responsive transcription factor 2b Chr2 + View
Cardamine hirsuta CARHR022540 Ethylene-responsive transcription factor 5 Chr1 + View
Carya illinoinensis CiPaw.06G020700 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr06 - View
Carya illinoinensis CiPaw.05G236200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr05 + View
Carya illinoinensis CiPaw.03G140400 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr03 + View
Citrullus lanatus ClCG01G018900 Ethylene-responsive transcription factor 5 CG_Chr01 - View
Cucumis melo MELO3C010425.2 ethylene-responsive transcription factor RAP2-13-like chr07 - View
Carica papaya Cpa.g.sc36.112 supercontig_36 + View
Chenopodium quinoa AUR62027727 RAP2-4: Ethylene-responsive transcription factor RAP2-4 C_Quinoa_Scaffold_3784 + View
Chenopodium quinoa AUR62018918 RAP2-4: Ethylene-responsive transcription factor RAP2-4 C_Quinoa_Scaffold_3876 - View
Chenopodium quinoa AUR62003776 RAP2-4: Ethylene-responsive transcription factor RAP2-4 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0002s2497 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_2 + View
Capsella rubella Carub.0001s2174 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_4G028670 ethylene-responsive transcription factor RAP2-13-like chr4 - View
Cucumis sativus L. CsaV3_6G045580 ethylene-responsive transcription factor ERF060 chr6 - View
Daucus carota DCAR_014234 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv21925 GWHABJS00000021 - View
Davidia involucrata Dinv13032 GWHABJS00000011 + View
Davidia involucrata Dinv44756 GWHABJS00000002 + View
Durio zibethinus Duzib041G0297 NW_019167826.1 - View
Durio zibethinus Duzib116G0733 NW_019167949.1 - View
Durio zibethinus Duzib093G0350 NW_019167937.1 + View
Durio zibethinus Duzib147G1624 NW_019168470.1 + View
Erigeron canadensis ECA246G1856 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G0255 Conyza_canadensis_scaffold:7 + View
Erythranthe guttata Migut.N02912 scaffold_14 - View
Eutrema salsugineum Thhalv10008326m.g PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10018771m.g PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED scaffold_9 - View
Fragaria x ananassa FAN04G1489 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb5-4 - View
Fragaria x ananassa FAN23G0016 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-3 - View
Fragaria x ananassa FAN13G0874 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb5-2 - View
Fragaria x ananassa FAN08G0222 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb5-3 + View
Fragaria x ananassa FAN26G2713 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb1-2 - View
Fragaria vesca FvH4_5g37820 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Fvb5 - View
Gossypium hirsutum Gohir.A06G037400 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A06 - View
Gossypium hirsutum Gohir.A02G075900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A02 + View
Gossypium hirsutum Gohir.D06G038900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D06 - View
Gossypium hirsutum Gohir.D02G083100 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D02 + View
Gossypium hirsutum Gohir.D05G230700 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED D05 - View
Gossypium hirsutum Gohir.A05G227900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED A05 - View
Glycine max Glyma.11G239200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm11 + View
Glycine max Glyma.18G018200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm18 - View
Glycine max Glyma.06G105000 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm06 - View
Glycine max Glyma.13G088100 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm13 + View
Glycine max Glyma.08G137600 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm08 - View
Glycine max Glyma.04G103900 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm04 - View
Glycine max Glyma.14G171500 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Gm14 + View
Gossypium raimondii Gorai.010G043200 Chr10 - View
Gossypium raimondii Gorai.009G238800 Chr09 - View
Gossypium raimondii Gorai.005G093500 Chr05 + View
Lupinus albus Lalb_Chr23g0270641 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr23 + View
Lupinus albus Lalb_Chr08g0241941 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr08 + View
Lupinus albus Lalb_Chr11g0065511 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr11 - View
Lupinus albus Lalb_Chr17g0344111 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr17 - View
Lupinus albus Lalb_Chr10g0102251 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lalb_Chr10 - View
Lotus japonicus Lj4g0018450 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED chr4 + View
Lotus japonicus Lj1g0021142 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED chr1 + View
Lonicera japonica Lj4P885T10 GWHAAZE00000004 + View
Lonicera japonica Lj4P106T40 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_9_43700 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Lsat_1_v8_lg_9 + View
Magnolia biondii MBI02_g36656_MAGBIO AED:0.00 Chr02 + View
Malus domestica MD15G1326800 Integrase-type DNA-binding superfamily protein Chr15 - View
Malus domestica MD08G1180200 related to AP2 4 Chr08 + View
Malus domestica MD15G1365500 related to AP2 4 Chr15 + View
Manihot esculenta Manes.02G154400 Chromosome02 - View
Manihot esculenta Manes.18G069000 Chromosome18 - View
Manihot esculenta Manes.12G136800 Chromosome12 - View
Medicago truncatula Medtr3g074130 ethylene response factor chr3 + View
Nelumbo nucifera Nn1g05310 chr1 + View
Nicotiana tabacum Nitab4.5_0000421g0100 AP2/ERF domain, DNA-binding domain Nitab4.5_0000421 - View
Oryza sativa ssp. japonica Os09g0369000 A-6 type of DREB transcription factor, AP2/EREBP family protein, Positive regulation of tolerance to osmotic and cold stress chr09 + View
Oryza sativa ssp. japonica Os02g0752800 Similar to Dehydration responsive element binding protein 2B (DREB2B protein). chr02 + View
Petunia axillaris Peaxi162Scf00041g00061 Ethylene-responsive transcription factor RAP2-4 Peaxi162Scf00041 + View
Petunia axillaris Peaxi162Scf00160g00148 Ethylene-responsive transcription factor RAP2-4 Peaxi162Scf00160 - View
Punica granatum PGR042G1233 NC_045130.1 + View
Prunus persica Prupe.6G182200 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Pp06 + View
Prunus persica Prupe.1G513600 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Pp01 + View
Pisum sativum Psat5g137480 AP2 domain chr5LG3 + View
Papaver somniferum PSO133G0115 NW_020618823.1 + View
Papaver somniferum PSO210G4526 NC_039359.1 + View
Papaver somniferum PSO447G0069 NW_020621936.1 + View
Populus trichocarpa Potri.007G090600 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr07 + View
Populus trichocarpa Potri.002G094200 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr02 + View
Populus trichocarpa Potri.005G168700 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr05 - View
Phaseolus vulgaris Phvul.002G254500 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr02 + View
Phaseolus vulgaris Phvul.009G029600 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr09 + View
Phaseolus vulgaris Phvul.001G251200 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr01 + View
Phaseolus vulgaris Phvul.008G172200 PTHR31657:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED Chr08 + View
Quercus lobata QL12p036229 12 + View
Rosa chinensis RcHm_v2.0_Chr7g0239701 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim10G0159000 chr10 + View
Rhododendron simsii Rhsim06G0084700 chr06 - View
Salvia bowleyana SalBow7G2004 GWHASIU00000005 + View
Salix brachista Sabra05G0125900 GWHAAZH00000005 - View
Salix brachista Sabra05G0063700 GWHAAZH00000005 - View
Salix brachista Sabra02G0074300 GWHAAZH00000002 + View
Salix brachista Sabra07G0074300 GWHAAZH00000007 + View
Simmondsia chinensis Sc01g0000280 GWHAASQ00000001 + View
Simmondsia chinensis Sc23g0000080 GWHAASQ00000023 + View
Sechium edule Sed0020153 LG04 - View
Sechium edule Sed0020020 LG14 - View
Sechium edule Sed0014356 LG04 + View
Solanum lycopersicum Solyc04g072900.1 dehydration-responsive element binding protein 3 SL4.0ch04 + View
Solanum lycopersicum Solyc12g056980.1 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2ZQC4_CAPAN) SL4.0ch12 + View
Solanum lycopersicum Solyc04g054910.4 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2ZQC4_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp1g19690 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED ch1-1 + View
Schrenkiella parvula Sp5g33210 PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED ch5-7 + View
Solanum pennellii Sopen04g029080 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. | related to AP2 4 (RAP2.4) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen04g024720 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. | Integrase-type DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400008538 Dehydration-responsive element binding protein 3 ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400009475 Dehydration-responsive element binding protein 3 ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400020625 AP2/ERF domain-containing transcription factor ST4.03ch04 - View
Trochodendron aralioides TAR381G1046 group11 - View
Theobroma cacao Thecc.08G109900 AP2 4 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104800157 ethylene-responsive transcription factor RAP2-4 NW_010969032.1 - View
Tarenaya hassleriana THA.LOC104810880 ethylene-responsive transcription factor RAP2-4 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104816881 ethylene-responsive transcription factor ERF055 NW_010960187.1 - View
Tripterygium wilfordii TWI56G1017 NC_052242.1 + View
Tripterygium wilfordii TWI12G1437 NC_052243.1 + View
Vigna mungo VMungo1309G1651 CM024072.1 - View
Vigna mungo VMungo0251G1631 CM024069.1 - View
Vitis vinifera GSVIVG01009007001 chr18 + View