Gene: Sopen04g024720
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g024720
- Transcript Identifier Sopen04g024720.1
- Gene Type Coding gene
- Location Spenn-ch04 : 65109360-65110469 : positive
Gene Family Information
- ID HOM05D000609
- #Genes/#Species 929/94
- Phylogenetic origin
- ID ORTHO05D000462
- #Genes/#Species 905/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen04g024720.1
Descriptions
- Description encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. | Integrase-type DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009415 | ISO | PLAZA Integrative Orthology | response to water | AT1G36060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G39780 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G36060 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G36060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.2 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB) |