Gene: AT1G22190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G22190
  • Transcript Identifier AT1G22190.1
  • Gene Type Coding gene
  • Location Chr1 : 7836245-7837030 : positive

Gene Family Information

  • ID HOM05D000609
  • #Genes/#Species 929/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G22190.1
  • Alias RAP2.4,related to AP2 4
  • uniprot Q9LM15

Descriptions

  • Description Integrase-type DNA-binding superfamily protein
  • Computational description Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5992 Blast hits to 5760 proteins in 260 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5935; Viruses - 12; Other Eukaryotes - 35 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009620
IEP
Gene Ontologyresponse to fungus1
GO:0009414
IEP
Gene Ontologyresponse to water deprivation2
GO:0009409
IEP
Gene Ontologyresponse to cold2
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
TAS
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IDA
IBA
Gene Ontologysequence-specific DNA binding2 5
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6
GO:0005515
IPI
Gene Ontologyprotein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
IC
Gene Ontologynucleus3 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)