Gene: Carub.0001s2174

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2174
  • Transcript Identifier Carub.0001s2174.1
  • Gene Type Coding gene
  • Location scaffold_1 : 7822270-7823118 : positive

Gene Family Information

  • ID HOM05D000609
  • #Genes/#Species 929/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2174.v1.1
  • pacid 39227447
  • synonym Carubv10009949m.g

Descriptions

  • Description PTHR31657//PTHR31657:SF9 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G22190
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G22190
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT1G22190
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G22190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G22190
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G22190
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G22190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G22190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)