Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.03g138870 Ras GTPase-activating protein-binding protein 1 (G3BP-1) (EC 3.6.4.12) (EC 3.6.4.13) (ATP-dependent DNA/RNA helicase G3BP) AmaHy_arrow1_Scaffold_3 + View
Ah.02g114090 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11670 LG-4 - View
Actinidia chinensis Actinidia18985 Lachesis_group9 - View
Actinidia chinensis Actinidia35040 Lachesis_group2 - View
Actinidia chinensis Actinidia04817 Lachesis_group1 - View
Arabidopsis lyrata AL8G37630 scaffold_8 + View
Arabidopsis lyrata AL2G28340 scaffold_2 + View
Arabidopsis lyrata AL1G25520 scaffold_1 + View
Avicennia marina MSTRG.15448 ScioBoG_19538_HRSCAF_19626 + View
Aquilegia oxysepala Aqoxy3G03678 CHR03 + View
Aquilegia oxysepala Aqoxy3G00521 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N01RGU PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YCZ32I PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: transport%2C nucleocytoplasmic transport%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nuclear transport factor 2%2C Eukaryote (InterPro:IPR018222)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT2G03640.1)%3B Has 1427 Blast hits to 1403 proteins in 215 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 793%3B Fungi - 209%3B Plants - 296%3B Viruses - 0%3B Other Eukaryotes - 103 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: transport%2C nucleocytoplasmic transport%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075)%2C Nuclear transport factor 2%2C Eukaryote (InterPro:IPR018222)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1)%3B Has 35964 Blast hits to 15476 proteins in 1126 species: Archae - 10%3B Bacteria - 13365%3B Metazoa - 10215%3B Fungi - 3021%3B Plants - 4733%3B Viruses - 543%3B Other Eukaryotes - 4077 (source: NCBI BLink). Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: transport%2C nucleocytoplasmic transport%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nuclear transport factor 2%2C Eukaryote (InterPro:IPR018222)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1)%3B Has 36196 Blast hits to 15965 proteins in 1132 species: Archae - 9%3B Bacteria - 13386%3B Metazoa - 10288%3B Fungi - 3119%3B Plants - 4760%3B Viruses - 542%3B Other Eukaryotes - 4092 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g33186 ChrC06 - View
Brassica napus C09p08020 C09 + View
Brassica napus A07p35560 A07 + View
Brassica napus C07p44750 C07 + View
Brassica napus A09p07180 A09 + View
Brassica napus A03p46690 A03 + View
Brassica oleracea BolC9t53716H C9 + View
Brassica oleracea BolC6t39364H C6 + View
Brassica oleracea BolC7t44998H C7 + View
Brassica rapa BraA03t13792Z A03 + View
Brassica rapa BraA07t31144Z A07 + View
Brassica rapa BraA09t36367Z A09 + View
Beta vulgaris EL10Ac5g11144 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0007441 hypothetical protein PRUPE_ppa005346mg [Prunus persica] Chr15 - View
Camellia sinensis var. sinensis CSS0045307 unnamed protein product [Coffea canephora] Chr2 + View
Cannabis sativa CANSAT64G2708 NC_044379.1 + View
Cicer arietinum L. Ca_21765_v3 Ca_LG7_v3 + View
Corylus avellana Haze_14425 Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_11900 Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_07738 Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc11_g11920 Putative Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain chr11 + View
Citrus clementina Ciclev10031630m.g scaffold_4 + View
Citrus clementina Ciclev10020038m.g scaffold_3 - View
Ceratophyllum demersum CDE04G2556 2 + View
Carpinus fangiana Cfa007672 Cfa03 - View
Carpinus fangiana Cfa019346 Cfa08 - View
Carpinus fangiana Cfa008874 Cfa03 + View
Cardamine hirsuta CARHR274690 Nuclear transport factor 2 family protein Chr8 + View
Carya illinoinensis CiPaw.04G055200 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr04 + View
Citrullus lanatus ClCG06G015590 RNA binding protein, putative CG_Chr06 + View
Chenopodium quinoa AUR62021547 nxt3: Putative G3BP-like protein C_Quinoa_Scaffold_1675 - View
Chenopodium quinoa AUR62008546 nxt3: Putative G3BP-like protein C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0002s1584 PTHR10693:SF23 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN-RELATED scaffold_2 + View
Capsella rubella Carub.0008s2167 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_8 + View
Daucus carota DCAR_011564 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv34937 GWHABJS00000012 + View
Davidia involucrata Dinv34062 GWHABJS00000008 + View
Davidia involucrata Dinv22771 GWHABJS00000019 + View
Davidia involucrata Dinv17425 GWHABJS00000006 + View
Davidia involucrata Dinv33833 GWHABJS00000014 - View
Durio zibethinus Duzib147G1063 NW_019168470.1 + View
Durio zibethinus Duzib068G0776 NW_019167838.1 - View
Durio zibethinus Duzib264G0009 NW_019167960.1 - View
Durio zibethinus Duzib205G1978 NW_019168381.1 - View
Durio zibethinus Duzib084G0887 NW_019167827.1 - View
Erigeron canadensis ECA246G0234 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00605 Chr02 - View
Eucalyptus grandis Eucgr.K02533 Chr11 - View
Erythranthe guttata Migut.L01184 scaffold_12 + View
Erythranthe guttata Migut.H00619 scaffold_8 + View
Eutrema salsugineum Thhalv10005527m.g PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Eutrema salsugineum Thhalv10018584m.g PTHR10693:SF23 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN-RELATED scaffold_9 - View
Fragaria x ananassa FAN18G4294 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN07G1729 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Fvb4-4 - View
Fragaria x ananassa FAN22G2000 PTHR10693:SF27 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Fvb4-1 + View
Fragaria x ananassa FAN12G0735 PTHR10693:SF27 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Fvb4-3 - View
Fragaria x ananassa FAN08G2329 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN13G2713 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN17G0332 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Fvb4-2 - View
Fragaria vesca FvH4_5g13730 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb5 + View
Fragaria vesca FvH4_6g46800 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Fragaria vesca FvH4_4g29890 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Fvb4 + View
Gossypium hirsutum Gohir.D12G186200 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED D12 - View
Gossypium hirsutum Gohir.A12G183100 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D03G096900 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED D03 - View
Gossypium hirsutum Gohir.A13G083000 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN A13 + View
Glycine max Glyma.18G267400 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm18 - View
Glycine max Glyma.05G020200 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm05 + View
Glycine max Glyma.08G246600 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm08 - View
Gossypium raimondii Gorai.008G199600 Chr08 - View
Gossypium raimondii Gorai.003G101700 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0060F.1_g033000 Hma1.2p1_0060F.1 + View
Lupinus albus Lalb_Chr12g0197251 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr12 - View
Lotus japonicus Lj1g0024360 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj4g0001243 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED chr4 + View
Lactuca sativa Lsat_1_v5_gn_5_22601 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_3_97460 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 - View
Malus domestica MD16G1060300 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Chr16 + View
Malus domestica MD14G1212900 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Chr14 - View
Malus domestica MD17G1060400 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Chr17 - View
Malus domestica MD06G1226000 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Chr06 - View
Manihot esculenta Manes.01G027100 Chromosome01 + View
Manihot esculenta Manes.14G086400 Chromosome14 - View
Manihot esculenta Manes.06G083600 Chromosome06 + View
Manihot esculenta Manes.05G109900 Chromosome05 - View
Medicago truncatula Medtr4g109640 ras GTPase-activating binding-like protein chr4 - View
Nelumbo nucifera Nn3g17465 chr3 - View
Nelumbo nucifera Nn4g23441 chr4 - View
Oryza sativa ssp. japonica Os03g0418800 RNA recognition motif domain domain containing protein. chr03 + View
Oryza sativa ssp. japonica Os07g0603100 Nucleotide-binding, alpha-beta plait domain containing protein. chr07 - View
Petunia axillaris Peaxi162Scf00175g00330 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Peaxi162Scf00175 - View
Prunus persica Prupe.5G206200 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Pp05 - View
Prunus persica Prupe.3G254500 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Pp03 + View
Prunus persica Prupe.1G288100 Pp01 - View
Populus trichocarpa Potri.015G058700 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr15 - View
Populus trichocarpa Potri.017G094600 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr17 - View
Populus trichocarpa Potri.008G096700 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Chr08 - View
Populus trichocarpa Potri.010G157800 PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Chr10 + View
Phaseolus vulgaris Phvul.008G032800 PTHR10693//PTHR10693:SF25 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Phaseolus vulgaris Phvul.003G184000 Chr03 + View
Quercus lobata QL02p067523 CM012294 + View
Quercus lobata QL10p019819 10 - View
Rosa chinensis RcHm_v2.0_Chr4g0438161 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr7g0183211 RcHm_v2.0_Chr7 - View
Striga asiatica SGA_v2.0_scaffold4G02381 scaffold4 + View
Salix brachista Sabra08G0072900 GWHAAZH00000008 - View
Salix brachista Sabra15G0084200 GWHAAZH00000015 - View
Salix brachista Sabra17G0083400 GWHAAZH00000017 - View
Simmondsia chinensis Sc04g0004390 GWHAASQ00000004 - View
Simmondsia chinensis Sc04g0007530 GWHAASQ00000004 + View
Sechium edule Sed0001974 LG12 - View
Sechium edule Sed0006272 LG08 - View
Schrenkiella parvula Sp2g24290 PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED ch2-4 + View
Solanum pennellii Sopen02g016060 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: transport, nucleocytoplasmic transport | LOCATED IN: intracellular | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 , RNA recognition motif, RNP-1 , Nuclear transport factor 2, Eukaryote , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400001461 Ras-GTPase-activating protein-binding protein ST4.03ch02 + View
Selenicereus undatus Hund02577 Scaffold_33678 - View
Selenicereus undatus Hund09922 Scaffold_10417 + View
Trochodendron aralioides TAR374G1402 group12 - View
Trochodendron aralioides TAR629G1969 group0 + View
Theobroma cacao Thecc.04G096300 Nuclear transport factor 2 family protein with RNA binding domain Chromosome_4 - View
Theobroma cacao Thecc.02G329600 Nuclear transport factor 2 family protein with RNA binding domain Chromosome_2 + View
Theobroma cacao Thecc.03G103100 RNA binding protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104818351 ras GTPase-activating protein-binding protein 2-like NW_010966092.1 - View
Tarenaya hassleriana THA.LOC104801144 ras GTPase-activating protein-binding protein 2 NW_010960188.1 + View
Trifolium pratense TPR.G2032 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI32G0419 NC_052254.1 - View
Vaccinium macrocarpon vmacro16491 Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05640 Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0311 CM024074.1 - View
Vitis vinifera GSVIVG01008107001 chr17 + View
Vitis vinifera GSVIVG01032909001 chr14 - View
Vitis vinifera GSVIVG01012227001 chr1 + View
Zea mays Zm00001eb326920 Zm00001e035497 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 7 - View
Zea mays Zm00001eb393140 Zm00001e038048 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 9 + View