Gene: Thecc.04G096300

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G096300
  • Transcript Identifier Thecc.04G096300.1
  • Gene Type Coding gene
  • Location Chromosome_4 : 18572374-18577057 : negative

Gene Family Information

  • ID HOM05D000622
  • #Genes/#Species 916/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G096300.v2.1
  • pacid 42021569
  • ancestorIdentifier Thecc1EG018776.CGDv1.1
  • ancestorIdentifier Thecc1EG018776t2.CGDv1.1

Descriptions

  • Description Nuclear transport factor 2 family protein with RNA binding domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090332
ISO
PLAZA Integrative Orthologystomatal closure AT5G48650
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT5G48650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G07250
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G48650
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G48650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032710 NTF2-like domain superfamily
IPR035979 RNA-binding domain superfamily
IPR039539 Ras GTPase-activating protein-binding protein
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR018222 Nuclear transport factor 2, eukaryote
IPR002075 Nuclear transport factor 2
Mapman id Description
16.8.1 RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP)