Functional clusters

Information

  • Type InterPro
  • Description AAA+ ATPase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC04 5 CH_bca_1713 6 18 0.000372078
Brassica napus A09 5 CH_bna_822 7 19 0.0000125619
Corylus avellana 2 5 CH_cav_325 5 5 0.0000027178
Davidia involucrata GWHABJS00000007 5 CH_din_609 4 4 0.000191133
Medicago truncatula chr1 5 CH_mtr_1123 7 25 0.00019784
Physcomitrium patens scaffold_30 5 CH_ppa_187 10 71 0.0000613039
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_122 17 54 3.99131e-18
Sequoiadendron giganteum chr3 5 CH_sgi_389 15 45 0.0000000000000536138
Brassica carinata ChrC04 6 CH_bca_1713 6 18 0.000372078
Brassica napus A09 6 CH_bna_822 7 19 0.0000125619
Corylus avellana 2 6 CH_cav_325 5 5 0.0000027178
Davidia involucrata GWHABJS00000007 6 CH_din_609 4 4 0.000191133
Medicago truncatula chr1 6 CH_mtr_1123 7 25 0.00019784
Physcomitrium patens scaffold_30 6 CH_ppa_187 10 71 0.0000613039
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_122 17 54 3.99131e-18
Sequoiadendron giganteum chr3 6 CH_sgi_389 15 45 0.0000000000000536138

Available child term results

Ontology identifier Description Number of clusters
IPR003439 ABC transporter-like, ATP-binding domain 61
IPR034001 ATP-binding cassette transporter, PDR-like subfamily G, domain 1 63
IPR034003 ATP-binding cassette transporter, PDR-like subfamily G, domain 2 62
IPR034348 RLI, domain 1 12

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001