Functional clusters
Information
- Type InterPro
- Description ABC transporter-like, ATP-binding domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr6 | 5 | CH_acertr_435 | 4 | 4 | 0.00000676831 |
Acer truncatum | chr1 | 5 | CH_acertr_812 | 4 | 7 | 0.000234688 |
Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_342 | 7 | 13 | 0.0000000029045 |
Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_383 | 7 | 15 | 0.0000000108068 |
Capsicum annuum | PGAv.1.6.scaffold484 | 5 | CH_can_452 | 4 | 4 | 0.000013432 |
Carpinus fangiana | Cfa05 | 5 | CH_cfa_383 | 5 | 12 | 0.0000464627 |
Carya illinoinensis | Chr11 | 5 | CH_cil_493 | 4 | 4 | 0.00000863263 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_496 | 4 | 5 | 0.0000329242 |
Eucalyptus grandis | Chr11 | 5 | CH_egr_446 | 12 | 63 | 0.0000000000337333 |
Fragaria vesca | Fvb4 | 5 | CH_fve_114 | 10 | 32 | 0.00000000000154235 |
Malus domestica | Chr05 | 5 | CH_mdo_1041 | 4 | 6 | 0.000151536 |
Medicago truncatula | chr4 | 5 | CH_mtr_422 | 6 | 8 | 0.00000000486369 |
Nelumbo nucifera | chr6 | 5 | CH_nnu_620 | 4 | 12 | 0.000864054 |
Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_246 | 5 | 7 | 0.0000000694222 |
Pisum sativum | chr7LG7 | 5 | CH_psa_67 | 8 | 10 | 0.0000000000000697373 |
Pisum sativum | chr4LG4 | 5 | CH_psa_774 | 5 | 23 | 0.00097616 |
Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_170 | 14 | 73 | 0.00000000000000157406 |
Rhododendron simsii | chr07 | 5 | CH_rsi_1003 | 4 | 7 | 0.000829625 |
Rhododendron simsii | chr10 | 5 | CH_rsi_381 | 6 | 9 | 0.0000000533695 |
Rhododendron simsii | chr11 | 5 | CH_rsi_87 | 11 | 13 | 1.66143e-19 |
Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_244 | 5 | 5 | 0.00000000850401 |
Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1269 | 6 | 13 | 0.0000010146 |
Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1489 | 6 | 19 | 0.0000156422 |
Sequoiadendron giganteum | chr11 | 5 | CH_sgi_2362 | 4 | 6 | 0.000376119 |
Sequoiadendron giganteum | chr5 | 5 | CH_sgi_286 | 9 | 9 | 6.93762e-17 |
Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_446 | 4 | 4 | 0.00000269419 |
Selenicereus undatus | Scaffold_2055 | 5 | CH_sun_349 | 3 | 3 | 0.000650735 |
Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_390 | 4 | 4 | 0.0000126124 |
Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_450 | 7 | 46 | 0.0000542343 |
Vitis vinifera | chr9 | 5 | CH_vvi_444 | 5 | 9 | 0.0000203048 |
Acer truncatum | chr6 | 6 | CH_acertr_435 | 4 | 4 | 0.00000676831 |
Acer truncatum | chr1 | 6 | CH_acertr_812 | 4 | 7 | 0.000234688 |
Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_342 | 7 | 13 | 0.0000000029045 |
Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_383 | 7 | 15 | 0.0000000108068 |
Capsicum annuum | PGAv.1.6.scaffold484 | 6 | CH_can_452 | 4 | 4 | 0.000013432 |
Carpinus fangiana | Cfa05 | 6 | CH_cfa_383 | 5 | 12 | 0.0000464627 |
Carya illinoinensis | Chr11 | 6 | CH_cil_493 | 4 | 4 | 0.00000863263 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_496 | 4 | 5 | 0.0000329242 |
Eucalyptus grandis | Chr11 | 6 | CH_egr_446 | 12 | 63 | 0.0000000000337333 |
Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_325 | 5 | 5 | 0.000000100403 |
Fragaria vesca | Fvb4 | 6 | CH_fve_114 | 10 | 32 | 0.00000000000154235 |
Malus domestica | Chr05 | 6 | CH_mdo_1041 | 4 | 6 | 0.000151536 |
Medicago truncatula | chr4 | 6 | CH_mtr_422 | 6 | 8 | 0.00000000486369 |
Nelumbo nucifera | chr6 | 6 | CH_nnu_620 | 4 | 12 | 0.000864054 |
Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_246 | 5 | 7 | 0.0000000694222 |
Pisum sativum | chr7LG7 | 6 | CH_psa_67 | 8 | 10 | 0.0000000000000697373 |
Pisum sativum | chr4LG4 | 6 | CH_psa_774 | 5 | 23 | 0.00097616 |
Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_170 | 14 | 73 | 0.00000000000000157406 |
Rhododendron simsii | chr07 | 6 | CH_rsi_1003 | 4 | 7 | 0.000829625 |
Rhododendron simsii | chr10 | 6 | CH_rsi_381 | 6 | 9 | 0.0000000533695 |
Rhododendron simsii | chr11 | 6 | CH_rsi_87 | 11 | 13 | 1.66143e-19 |
Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_244 | 5 | 5 | 0.00000000850401 |
Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1269 | 6 | 13 | 0.0000010146 |
Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1489 | 6 | 19 | 0.0000156422 |
Sequoiadendron giganteum | chr11 | 6 | CH_sgi_2362 | 4 | 6 | 0.000376119 |
Sequoiadendron giganteum | chr5 | 6 | CH_sgi_286 | 9 | 9 | 6.93762e-17 |
Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_446 | 4 | 4 | 0.00000269419 |
Selenicereus undatus | Scaffold_2055 | 6 | CH_sun_349 | 3 | 3 | 0.000650735 |
Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_390 | 4 | 4 | 0.0000126124 |
Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_450 | 7 | 46 | 0.0000542343 |
Vitis vinifera | chr9 | 6 | CH_vvi_444 | 5 | 9 | 0.0000203048 |
Available child term results
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |