Functional clusters

Information

  • Type InterPro
  • Description ABC transporter-like, ATP-binding domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_435 4 4 0.00000676831
Acer truncatum chr1 5 CH_acertr_812 4 7 0.000234688
Camellia sinensis var. sinensis Chr14 5 CH_camsi_342 7 13 0.0000000029045
Camellia sinensis var. sinensis Chr7 5 CH_camsi_383 7 15 0.0000000108068
Capsicum annuum PGAv.1.6.scaffold484 5 CH_can_452 4 4 0.000013432
Carpinus fangiana Cfa05 5 CH_cfa_383 5 12 0.0000464627
Carya illinoinensis Chr11 5 CH_cil_493 4 4 0.00000863263
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_496 4 5 0.0000329242
Eucalyptus grandis Chr11 5 CH_egr_446 12 63 0.0000000000337333
Fragaria vesca Fvb4 5 CH_fve_114 10 32 0.00000000000154235
Malus domestica Chr05 5 CH_mdo_1041 4 6 0.000151536
Medicago truncatula chr4 5 CH_mtr_422 6 8 0.00000000486369
Nelumbo nucifera chr6 5 CH_nnu_620 4 12 0.000864054
Oryza sativa ssp. japonica chr09 5 CH_osa_246 5 7 0.0000000694222
Pisum sativum chr7LG7 5 CH_psa_67 8 10 0.0000000000000697373
Pisum sativum chr4LG4 5 CH_psa_774 5 23 0.00097616
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_170 14 73 0.00000000000000157406
Rhododendron simsii chr07 5 CH_rsi_1003 4 7 0.000829625
Rhododendron simsii chr10 5 CH_rsi_381 6 9 0.0000000533695
Rhododendron simsii chr11 5 CH_rsi_87 11 13 1.66143e-19
Salvia bowleyana GWHASIU00000004 5 CH_sbo_244 5 5 0.00000000850401
Sequoiadendron giganteum chr3 5 CH_sgi_1269 6 13 0.0000010146
Sequoiadendron giganteum chr2 5 CH_sgi_1489 6 19 0.0000156422
Sequoiadendron giganteum chr11 5 CH_sgi_2362 4 6 0.000376119
Sequoiadendron giganteum chr5 5 CH_sgi_286 9 9 6.93762e-17
Solanum tuberosum ST4.03ch05 5 CH_stu_446 4 4 0.00000269419
Selenicereus undatus Scaffold_2055 5 CH_sun_349 3 3 0.000650735
Trifolium pratense Tp57577_TGAC_v2_LG7 5 CH_tpr_390 4 4 0.0000126124
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_450 7 46 0.0000542343
Vitis vinifera chr9 5 CH_vvi_444 5 9 0.0000203048
Acer truncatum chr6 6 CH_acertr_435 4 4 0.00000676831
Acer truncatum chr1 6 CH_acertr_812 4 7 0.000234688
Camellia sinensis var. sinensis Chr14 6 CH_camsi_342 7 13 0.0000000029045
Camellia sinensis var. sinensis Chr7 6 CH_camsi_383 7 15 0.0000000108068
Capsicum annuum PGAv.1.6.scaffold484 6 CH_can_452 4 4 0.000013432
Carpinus fangiana Cfa05 6 CH_cfa_383 5 12 0.0000464627
Carya illinoinensis Chr11 6 CH_cil_493 4 4 0.00000863263
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_496 4 5 0.0000329242
Eucalyptus grandis Chr11 6 CH_egr_446 12 63 0.0000000000337333
Fragaria x ananassa Fvb4-3 6 CH_fan_325 5 5 0.000000100403
Fragaria vesca Fvb4 6 CH_fve_114 10 32 0.00000000000154235
Malus domestica Chr05 6 CH_mdo_1041 4 6 0.000151536
Medicago truncatula chr4 6 CH_mtr_422 6 8 0.00000000486369
Nelumbo nucifera chr6 6 CH_nnu_620 4 12 0.000864054
Oryza sativa ssp. japonica chr09 6 CH_osa_246 5 7 0.0000000694222
Pisum sativum chr7LG7 6 CH_psa_67 8 10 0.0000000000000697373
Pisum sativum chr4LG4 6 CH_psa_774 5 23 0.00097616
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_170 14 73 0.00000000000000157406
Rhododendron simsii chr07 6 CH_rsi_1003 4 7 0.000829625
Rhododendron simsii chr10 6 CH_rsi_381 6 9 0.0000000533695
Rhododendron simsii chr11 6 CH_rsi_87 11 13 1.66143e-19
Salvia bowleyana GWHASIU00000004 6 CH_sbo_244 5 5 0.00000000850401
Sequoiadendron giganteum chr3 6 CH_sgi_1269 6 13 0.0000010146
Sequoiadendron giganteum chr2 6 CH_sgi_1489 6 19 0.0000156422
Sequoiadendron giganteum chr11 6 CH_sgi_2362 4 6 0.000376119
Sequoiadendron giganteum chr5 6 CH_sgi_286 9 9 6.93762e-17
Solanum tuberosum ST4.03ch05 6 CH_stu_446 4 4 0.00000269419
Selenicereus undatus Scaffold_2055 6 CH_sun_349 3 3 0.000650735
Trifolium pratense Tp57577_TGAC_v2_LG7 6 CH_tpr_390 4 4 0.0000126124
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_450 7 46 0.0000542343
Vitis vinifera chr9 6 CH_vvi_444 5 9 0.0000203048

Available child term results

Ontology identifier Description Number of clusters
IPR034001 ATP-binding cassette transporter, PDR-like subfamily G, domain 1 63
IPR034003 ATP-binding cassette transporter, PDR-like subfamily G, domain 2 62

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001