Functional clusters

Information

  • Type Gene Ontology
  • Description dioxygenase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_240 5 5 0.0000000173084
Arabidopsis thaliana Chr1 3 CH_ath_269 4 5 0.00000694425
Corchorus olitorius AWUE01021101.1 3 CH_col_18 8 14 0.00000000042253
Corchorus olitorius AWUE01015458.1 3 CH_col_51 5 8 0.0000163725
Corchorus olitorius AWUE01014974.1 3 CH_col_6 11 14 2.16892e-17
Durio zibethinus NW_019167982.1 3 CH_dzi_59 6 6 0.0000000000908988
Lupinus albus Lalb_Chr01 3 CH_lal_73 7 11 0.000000000879265
Punica granatum NC_045131.1 3 CH_pgr_166 5 7 0.000000728092
Punica granatum NC_045129.1 3 CH_pgr_239 4 5 0.0000421506
Punica granatum NC_045129.1 3 CH_pgr_291 4 6 0.000126029
Solanum lycopersicum SL4.0ch01 3 CH_sly_518 4 8 0.000462004
Solanum tuberosum ST4.03ch01 3 CH_stu_107 7 9 0.00000000000670281
Solanum tuberosum ST4.03ch08 3 CH_stu_293 4 4 0.00000518449
Solanum tuberosum ST4.03ch06 3 CH_stu_591 5 23 0.000552744
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_240 5 5 0.0000000173084
Arabidopsis thaliana Chr1 4 CH_ath_269 4 5 0.00000694425
Corchorus olitorius AWUE01021101.1 4 CH_col_18 8 14 0.00000000042253
Corchorus olitorius AWUE01015458.1 4 CH_col_51 5 8 0.0000163725
Corchorus olitorius AWUE01014974.1 4 CH_col_6 11 14 2.16892e-17
Durio zibethinus NW_019167982.1 4 CH_dzi_59 6 6 0.0000000000908988
Lupinus albus Lalb_Chr01 4 CH_lal_73 7 11 0.000000000879265
Punica granatum NC_045131.1 4 CH_pgr_166 5 7 0.000000728092
Punica granatum NC_045129.1 4 CH_pgr_239 4 5 0.0000421506
Punica granatum NC_045129.1 4 CH_pgr_291 4 6 0.000126029
Solanum lycopersicum SL4.0ch01 4 CH_sly_518 4 8 0.000462004
Solanum tuberosum ST4.03ch01 4 CH_stu_107 7 9 0.00000000000670281
Solanum tuberosum ST4.03ch08 4 CH_stu_293 4 4 0.00000518449
Solanum tuberosum ST4.03ch06 4 CH_stu_591 5 23 0.000552744

Available child term results

Ontology identifier Description Number of clusters
GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity 30
GO:0004411 homogentisate 1,2-dioxygenase activity 12
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 92
GO:0016165 linoleate 13S-lipoxygenase activity 4
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 342
GO:0016706 2-oxoglutarate-dependent dioxygenase activity 18
GO:0016707 gibberellin 3-beta-dioxygenase activity 30
GO:0045431 flavonol synthase activity 16
GO:0045486 naringenin 3-dioxygenase activity 10
GO:0045544 gibberellin 20-oxidase activity 18
GO:0048244 phytanoyl-CoA dioxygenase activity 4
GO:0050313 sulfur dioxygenase activity 2
GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity 10
GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity 6
GO:0062131 3-butenylglucosinolate 2-hydroxylase activity 42
GO:0102672 fatty acid alpha-oxygenase activity 18
GO:1990136 linoleate 9S-lipoxygenase activity 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001