Functional clusters
Information
- Type Gene Ontology
- Description fatty acid alpha-oxygenase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-4 | 3 | CH_aar_206 | 2 | 2 | 0.000273698 |
Aquilegia oxysepala | CHR03 | 3 | CH_aox_185 | 2 | 2 | 0.0000801989 |
Brassica carinata | ChrC07 | 3 | CH_bca_821 | 2 | 2 | 0.000448905 |
Corchorus olitorius | AWUE01018132.1 | 3 | CH_col_80 | 2 | 2 | 0.000292099 |
Medicago truncatula | chr3 | 3 | CH_mtr_145 | 4 | 7 | 0.0000000000364108 |
Sechium edule | LG12 | 3 | CH_sed_270 | 2 | 2 | 0.000713419 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1198 | 2 | 4 | 0.000292277 |
Sapria himalayana | scaffold13_12996478 | 3 | CH_shi_218 | 2 | 4 | 0.000343063 |
Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_267 | 2 | 3 | 0.000227083 |
Aethionema arabicum | LG-4 | 4 | CH_aar_206 | 2 | 2 | 0.000273698 |
Aquilegia oxysepala | CHR03 | 4 | CH_aox_185 | 2 | 2 | 0.0000801989 |
Brassica carinata | ChrC07 | 4 | CH_bca_821 | 2 | 2 | 0.000448905 |
Corchorus olitorius | AWUE01018132.1 | 4 | CH_col_80 | 2 | 2 | 0.000292099 |
Medicago truncatula | chr3 | 4 | CH_mtr_145 | 4 | 7 | 0.0000000000364108 |
Sechium edule | LG12 | 4 | CH_sed_270 | 2 | 2 | 0.000713419 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1198 | 2 | 4 | 0.000292277 |
Sapria himalayana | scaffold13_12996478 | 4 | CH_shi_218 | 2 | 4 | 0.000343063 |
Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_267 | 2 | 3 | 0.000227083 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |