Functional clusters
Information
- Type Gene Ontology
- Description 3-butenylglucosinolate 2-hydroxylase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 3 | CH_arhy_241 | 3 | 3 | 0.0000000268895 |
| Brassica napus | A04 | 3 | CH_bna_371 | 2 | 2 | 0.0000185617 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_267 | 3 | 8 | 0.000000176607 |
| Carpinus fangiana | Cfa03 | 3 | CH_cfa_228 | 2 | 2 | 0.0000757346 |
| Carica papaya | supercontig_44 | 3 | CH_cpa_173 | 2 | 2 | 0.0000950661 |
| Davidia involucrata | GWHABJS00000014 | 3 | CH_din_288 | 2 | 2 | 0.000150038 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_314 | 4 | 13 | 0.000000000429962 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_119 | 5 | 32 | 0.0000000000201777 |
| Lupinus albus | Lalb_Chr19 | 3 | CH_lal_243 | 2 | 2 | 0.0000524824 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 3 | CH_lsa_187 | 3 | 7 | 0.000000138696 |
| Medicago truncatula | chr2 | 3 | CH_mtr_232 | 3 | 4 | 0.0000000101285 |
| Nelumbo nucifera | chr3 | 3 | CH_nnu_193 | 2 | 2 | 0.0000481684 |
| Prunus persica | Pp01 | 3 | CH_ppe_432 | 2 | 2 | 0.000447577 |
| Papaver somniferum | NC_039364.1 | 3 | CH_pso_565 | 3 | 39 | 0.00024314 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_241 | 3 | 5 | 0.0000000238381 |
| Rhododendron simsii | chr03 | 3 | CH_rsi_396 | 2 | 3 | 0.000193586 |
| Simmondsia chinensis | GWHAASQ00000025 | 3 | CH_sci_267 | 2 | 5 | 0.000851317 |
| Trochodendron aralioides | group16 | 3 | CH_tar_105 | 4 | 11 | 0.0000000269673 |
| Trochodendron aralioides | group1 | 3 | CH_tar_29 | 5 | 7 | 0.000000000000257799 |
| Tripterygium wilfordii | NC_052245.1 | 3 | CH_twi_88 | 3 | 3 | 0.0000000186743 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_104 | 3 | 5 | 0.000000129517 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 4 | CH_arhy_241 | 3 | 3 | 0.0000000268895 |
| Brassica napus | A04 | 4 | CH_bna_371 | 2 | 2 | 0.0000185617 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_267 | 3 | 8 | 0.000000176607 |
| Carpinus fangiana | Cfa03 | 4 | CH_cfa_228 | 2 | 2 | 0.0000757346 |
| Carica papaya | supercontig_44 | 4 | CH_cpa_173 | 2 | 2 | 0.0000950661 |
| Davidia involucrata | GWHABJS00000014 | 4 | CH_din_288 | 2 | 2 | 0.000150038 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_314 | 4 | 13 | 0.000000000429962 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_119 | 5 | 32 | 0.0000000000201777 |
| Lupinus albus | Lalb_Chr19 | 4 | CH_lal_243 | 2 | 2 | 0.0000524824 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 4 | CH_lsa_187 | 3 | 7 | 0.000000138696 |
| Medicago truncatula | chr2 | 4 | CH_mtr_232 | 3 | 4 | 0.0000000101285 |
| Nelumbo nucifera | chr3 | 4 | CH_nnu_193 | 2 | 2 | 0.0000481684 |
| Prunus persica | Pp01 | 4 | CH_ppe_432 | 2 | 2 | 0.000447577 |
| Papaver somniferum | NC_039364.1 | 4 | CH_pso_565 | 3 | 39 | 0.00024314 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_241 | 3 | 5 | 0.0000000238381 |
| Rhododendron simsii | chr03 | 4 | CH_rsi_396 | 2 | 3 | 0.000193586 |
| Simmondsia chinensis | GWHAASQ00000025 | 4 | CH_sci_267 | 2 | 5 | 0.000851317 |
| Trochodendron aralioides | group16 | 4 | CH_tar_105 | 4 | 11 | 0.0000000269673 |
| Trochodendron aralioides | group1 | 4 | CH_tar_29 | 5 | 7 | 0.000000000000257799 |
| Tripterygium wilfordii | NC_052245.1 | 4 | CH_twi_88 | 3 | 3 | 0.0000000186743 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_104 | 3 | 5 | 0.000000129517 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |