Functional clusters
Information
- Type Gene Ontology
- Description 2-oxoglutarate-dependent dioxygenase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr1 | 3 | CH_acertr_151 | 4 | 6 | 0.000000199212 |
Camellia sinensis var. sinensis | Chr15 | 3 | CH_camsi_481 | 4 | 15 | 0.0000358154 |
Cannabis sativa | NC_044371.1 | 3 | CH_cansat_81 | 5 | 10 | 0.00000000282825 |
Carica papaya | supercontig_162 | 3 | CH_cpa_57 | 4 | 5 | 0.000000114047 |
Helianthus annuus | HanXRQChr03 | 3 | CH_han_125 | 6 | 14 | 0.0000000000353223 |
Phaseolus vulgaris | Chr05 | 3 | CH_pvu_66 | 7 | 30 | 0.0000000000833057 |
Salix brachista | GWHAAZH00000001 | 3 | CH_sbr_308 | 3 | 5 | 0.00029501 |
Sequoiadendron giganteum | chr11 | 3 | CH_sgi_340 | 6 | 15 | 0.0000000000226422 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_565 | 4 | 5 | 0.0000000545385 |
Acer truncatum | chr1 | 4 | CH_acertr_151 | 4 | 6 | 0.000000199212 |
Camellia sinensis var. sinensis | Chr15 | 4 | CH_camsi_481 | 4 | 15 | 0.0000358154 |
Cannabis sativa | NC_044371.1 | 4 | CH_cansat_81 | 5 | 10 | 0.00000000282825 |
Carica papaya | supercontig_162 | 4 | CH_cpa_57 | 4 | 5 | 0.000000114047 |
Helianthus annuus | HanXRQChr03 | 4 | CH_han_125 | 6 | 14 | 0.0000000000353223 |
Phaseolus vulgaris | Chr05 | 4 | CH_pvu_66 | 7 | 30 | 0.0000000000833057 |
Salix brachista | GWHAAZH00000001 | 4 | CH_sbr_308 | 3 | 5 | 0.00029501 |
Sequoiadendron giganteum | chr11 | 4 | CH_sgi_340 | 6 | 15 | 0.0000000000226422 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_565 | 4 | 5 | 0.0000000545385 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0016707 | gibberellin 3-beta-dioxygenase activity | 30 |
GO:0045431 | flavonol synthase activity | 16 |
GO:0045486 | naringenin 3-dioxygenase activity | 10 |
GO:0045544 | gibberellin 20-oxidase activity | 18 |
GO:0048244 | phytanoyl-CoA dioxygenase activity | 4 |
GO:0052634 | C-19 gibberellin 2-beta-dioxygenase activity | 10 |
GO:0052635 | C-20 gibberellin 2-beta-dioxygenase activity | 6 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |