Functional clusters
Information
- Type Gene Ontology
- Description establishment of protein localization
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_193 | 6 | 7 | 0.00000140789 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_193 | 6 | 7 | 0.00000140789 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006605 | protein targeting | 10 |
| GO:0006606 | protein import into nucleus | 54 |
| GO:0006611 | protein export from nucleus | 16 |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | 14 |
| GO:0006623 | protein targeting to vacuole | 12 |
| GO:0006625 | protein targeting to peroxisome | 2 |
| GO:0006627 | protein processing involved in protein targeting to mitochondrion | 4 |
| GO:0006886 | intracellular protein transport | 6 |
| GO:0009306 | protein secretion | 2 |
| GO:0015031 | protein transport | 12 |
| GO:0016560 | protein import into peroxisome matrix, docking | 12 |
| GO:0017038 | protein import | 10 |
| GO:0030150 | protein import into mitochondrial matrix | 6 |
| GO:0030581 | symbiont intracellular protein transport in host | 14 |
| GO:0042306 | regulation of protein import into nucleus | 10 |
| GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | 14 |
| GO:0045036 | protein targeting to chloroplast | 2 |
| GO:0045040 | protein insertion into mitochondrial outer membrane | 14 |
| GO:0045048 | protein insertion into ER membrane | 4 |
| GO:0051205 | protein insertion into membrane | 2 |
| GO:0065002 | intracellular protein transmembrane transport | 2 |
| GO:0071211 | protein targeting to vacuole involved in autophagy | 8 |
| GO:0072594 | establishment of protein localization to organelle | 4 |
| GO:0090316 | positive regulation of intracellular protein transport | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |