Functional clusters

Information

  • Type Gene Ontology
  • Description protein targeting

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr10 3 CH_ccan_239 3 13 0.0000908043
Ceratophyllum demersum 4 3 CH_cde_161 6 63 0.000415966
Gossypium hirsutum A10 3 CH_ghi_676 4 14 0.000888783
Gossypium raimondii Chr11 3 CH_gra_350 4 16 0.000673775
Sequoiadendron giganteum chr2 3 CH_sgi_1052 3 3 0.0000986786
Coffea canephora chr10 4 CH_ccan_239 3 13 0.0000908043
Ceratophyllum demersum 4 4 CH_cde_161 6 63 0.000415966
Gossypium hirsutum A10 4 CH_ghi_676 4 14 0.000888783
Gossypium raimondii Chr11 4 CH_gra_350 4 16 0.000673775
Sequoiadendron giganteum chr2 4 CH_sgi_1052 3 3 0.0000986786

Available child term results

Ontology identifier Description Number of clusters
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 14
GO:0006623 protein targeting to vacuole 12
GO:0006625 protein targeting to peroxisome 2
GO:0006627 protein processing involved in protein targeting to mitochondrion 4
GO:0016560 protein import into peroxisome matrix, docking 12
GO:0030150 protein import into mitochondrial matrix 6
GO:0045036 protein targeting to chloroplast 2
GO:0045040 protein insertion into mitochondrial outer membrane 14
GO:0071211 protein targeting to vacuole involved in autophagy 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001