Functional clusters

Information

  • Type Gene Ontology
  • Description protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_429 3 3 0.0000204091
Brassica carinata ChrC09 3 CH_bca_646 4 44 0.000141631
Carica papaya supercontig_78 3 CH_cpa_106 3 4 0.00000650542
Eucalyptus grandis Chr03 3 CH_egr_383 5 21 0.0000000053552
Sapria himalayana scaffold29_7503565 3 CH_shi_254 2 2 0.000857706
Vigna mungo CM024070.1 3 CH_vmu_137 3 4 0.00000911573
Vanilla planifolia CM028158.1 3 CH_vpl_368 3 12 0.000817042
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_429 3 3 0.0000204091
Brassica carinata ChrC09 4 CH_bca_646 4 44 0.000141631
Carica papaya supercontig_78 4 CH_cpa_106 3 4 0.00000650542
Eucalyptus grandis Chr03 4 CH_egr_383 5 21 0.0000000053552
Sapria himalayana scaffold29_7503565 4 CH_shi_254 2 2 0.000857706
Vigna mungo CM024070.1 4 CH_vmu_137 3 4 0.00000911573
Vanilla planifolia CM028158.1 4 CH_vpl_368 3 12 0.000817042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001