Functional clusters
Information
- Type Gene Ontology
- Description protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 3 | CH_arhy_429 | 3 | 3 | 0.0000204091 |
| Brassica carinata | ChrC09 | 3 | CH_bca_646 | 4 | 44 | 0.000141631 |
| Carica papaya | supercontig_78 | 3 | CH_cpa_106 | 3 | 4 | 0.00000650542 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_383 | 5 | 21 | 0.0000000053552 |
| Sapria himalayana | scaffold29_7503565 | 3 | CH_shi_254 | 2 | 2 | 0.000857706 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_137 | 3 | 4 | 0.00000911573 |
| Vanilla planifolia | CM028158.1 | 3 | CH_vpl_368 | 3 | 12 | 0.000817042 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 4 | CH_arhy_429 | 3 | 3 | 0.0000204091 |
| Brassica carinata | ChrC09 | 4 | CH_bca_646 | 4 | 44 | 0.000141631 |
| Carica papaya | supercontig_78 | 4 | CH_cpa_106 | 3 | 4 | 0.00000650542 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_383 | 5 | 21 | 0.0000000053552 |
| Sapria himalayana | scaffold29_7503565 | 4 | CH_shi_254 | 2 | 2 | 0.000857706 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_137 | 3 | 4 | 0.00000911573 |
| Vanilla planifolia | CM028158.1 | 4 | CH_vpl_368 | 3 | 12 | 0.000817042 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |