Functional clusters
Information
- Type Gene Ontology
- Description intracellular protein transport
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr12 | 3 | CH_camsi_814 | 7 | 33 | 0.000798537 |
Magnolia biondii | Chr03 | 3 | CH_mbi_134 | 9 | 23 | 0.00000000177631 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_434 | 5 | 7 | 0.0000120755 |
Camellia sinensis var. sinensis | Chr12 | 4 | CH_camsi_814 | 7 | 33 | 0.000798537 |
Magnolia biondii | Chr03 | 4 | CH_mbi_134 | 9 | 23 | 0.00000000177631 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_434 | 5 | 7 | 0.0000120755 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0006605 | protein targeting | 10 |
GO:0006606 | protein import into nucleus | 54 |
GO:0006611 | protein export from nucleus | 16 |
GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | 14 |
GO:0006623 | protein targeting to vacuole | 12 |
GO:0006625 | protein targeting to peroxisome | 2 |
GO:0006627 | protein processing involved in protein targeting to mitochondrion | 4 |
GO:0016560 | protein import into peroxisome matrix, docking | 12 |
GO:0030150 | protein import into mitochondrial matrix | 6 |
GO:0042306 | regulation of protein import into nucleus | 10 |
GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | 14 |
GO:0045036 | protein targeting to chloroplast | 2 |
GO:0045040 | protein insertion into mitochondrial outer membrane | 14 |
GO:0065002 | intracellular protein transmembrane transport | 2 |
GO:0071211 | protein targeting to vacuole involved in autophagy | 8 |
GO:0090316 | positive regulation of intracellular protein transport | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |