Functional clusters

Information

  • Type Gene Ontology
  • Description organelle membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr4 3 CH_camsi_654 11 27 0.000233963
Helianthus annuus HanXRQChr11 3 CH_han_404 7 7 0.0000176658
Camellia sinensis var. sinensis Chr4 4 CH_camsi_654 11 27 0.000233963
Helianthus annuus HanXRQChr11 4 CH_han_404 7 7 0.0000176658

Available child term results

Ontology identifier Description Number of clusters
GO:0000139 Golgi membrane 10
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 34
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 20
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 22
GO:0000306 extrinsic component of vacuolar membrane 4
GO:0000421 autophagosome membrane 4
GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 10
GO:0000813 ESCRT I complex 2
GO:0000814 ESCRT II complex 20
GO:0005637 nuclear inner membrane 4
GO:0005639 integral component of nuclear inner membrane 2
GO:0005640 nuclear outer membrane 2
GO:0005741 mitochondrial outer membrane 2
GO:0005742 mitochondrial outer membrane translocase complex 8
GO:0005743 mitochondrial inner membrane 16
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 12
GO:0005747 mitochondrial respiratory chain complex I 6
GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) 2
GO:0005750 mitochondrial respiratory chain complex III 2
GO:0005753 mitochondrial proton-transporting ATP synthase complex 2
GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core 6
GO:0005774 vacuolar membrane 14
GO:0005779 integral component of peroxisomal membrane 2
GO:0005784 Sec61 translocon complex 8
GO:0005785 signal recognition particle receptor complex 12
GO:0005787 signal peptidase complex 18
GO:0005789 endoplasmic reticulum membrane 14
GO:0008250 oligosaccharyltransferase complex 6
GO:0009517 PSII associated light-harvesting complex II 2
GO:0009535 chloroplast thylakoid membrane 46
GO:0009706 chloroplast inner membrane 10
GO:0009707 chloroplast outer membrane 4
GO:0009923 fatty acid elongase complex 6
GO:0010006 Toc complex 2
GO:0010008 endosome membrane 10
GO:0016471 vacuolar proton-transporting V-type ATPase complex 4
GO:0017059 serine C-palmitoyltransferase complex 2
GO:0030093 chloroplast photosystem I 2
GO:0030095 chloroplast photosystem II 4
GO:0030121 AP-1 adaptor complex 4
GO:0030122 AP-2 adaptor complex 6
GO:0030126 COPI vesicle coat 8
GO:0030127 COPII vesicle coat 16
GO:0030176 integral component of endoplasmic reticulum membrane 6
GO:0031303 integral component of endosome membrane 4
GO:0031304 intrinsic component of mitochondrial inner membrane 2
GO:0031307 integral component of mitochondrial outer membrane 6
GO:0031313 extrinsic component of endosome membrane 6
GO:0031314 extrinsic component of mitochondrial inner membrane 52
GO:0031357 integral component of chloroplast inner membrane 12
GO:0031359 integral component of chloroplast outer membrane 2
GO:0031897 Tic complex 10
GO:0031966 mitochondrial membrane 4
GO:0032578 aleurone grain membrane 2
GO:0032585 multivesicular body membrane 2
GO:0032586 protein storage vacuole membrane 2
GO:0032588 trans-Golgi network membrane 2
GO:0032592 integral component of mitochondrial membrane 4
GO:0034998 oligosaccharyltransferase I complex 2
GO:0035451 extrinsic component of stromal side of plastid thylakoid membrane 2
GO:0035452 extrinsic component of plastid membrane 4
GO:0042406 extrinsic component of endoplasmic reticulum membrane 2
GO:0042720 mitochondrial inner membrane peptidase complex 8
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex 20
GO:0042765 GPI-anchor transamidase complex 4
GO:0070772 PAS complex 16
GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane 4
GO:0072546 EMC complex 20
GO:0098588 bounding membrane of organelle 2
GO:0098800 inner mitochondrial membrane protein complex 4
GO:1990578 perinuclear endoplasmic reticulum membrane 46

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001