Functional clusters

Information

  • Type Gene Ontology
  • Description vacuolar membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr2 3 CH_ath_333 6 11 0.0000208523
Cannabis sativa NC_044378.1 3 CH_cansat_293 6 11 0.000325764
Eucalyptus grandis Chr07 3 CH_egr_703 5 5 0.0000655865
Magnolia biondii Chr04 3 CH_mbi_342 6 8 0.00000978112
Physcomitrium patens Chr02 3 CH_ppa_9 15 30 0.0000000000526617
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_119 16 66 0.000000000000987977
Sequoiadendron giganteum chr4 3 CH_sgi_692 9 22 0.000000539441
Arabidopsis thaliana Chr2 4 CH_ath_333 6 11 0.0000208523
Cannabis sativa NC_044378.1 4 CH_cansat_293 6 11 0.000325764
Eucalyptus grandis Chr07 4 CH_egr_703 5 5 0.0000655865
Magnolia biondii Chr04 4 CH_mbi_342 6 8 0.00000978112
Physcomitrium patens Chr02 4 CH_ppa_9 15 30 0.0000000000526617
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_119 16 66 0.000000000000987977
Sequoiadendron giganteum chr4 4 CH_sgi_692 9 22 0.000000539441

Available child term results

Ontology identifier Description Number of clusters
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 34
GO:0000306 extrinsic component of vacuolar membrane 4
GO:0000421 autophagosome membrane 4
GO:0016471 vacuolar proton-transporting V-type ATPase complex 4
GO:0032586 protein storage vacuole membrane 2
GO:0070772 PAS complex 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001