Functional clusters

Information

  • Type Gene Ontology
  • Description endoplasmic reticulum membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4119_HRSCAF_4138 3 CH_ama_75 8 65 0.000240432
Chara braunii BFEA01000572 3 CH_cbr_63 5 9 0.00000265631
Cardamine hirsuta Chr5 3 CH_chi_393 4 8 0.000904427
Corchorus olitorius AWUE01019666.1 3 CH_col_8 9 9 0.00000000000000427471
Quercus lobata 9 3 CH_qlo_586 5 6 0.00000480772
Simmondsia chinensis GWHAASQ00000007 3 CH_sci_178 4 5 0.000114838
Solanum pennellii Spenn-ch02 3 CH_spe_400 4 8 0.000380567
Avicennia marina ScioBoG_4119_HRSCAF_4138 4 CH_ama_75 8 65 0.000240432
Chara braunii BFEA01000572 4 CH_cbr_63 5 9 0.00000265631
Cardamine hirsuta Chr5 4 CH_chi_393 4 8 0.000904427
Corchorus olitorius AWUE01019666.1 4 CH_col_8 9 9 0.00000000000000427471
Quercus lobata 9 4 CH_qlo_586 5 6 0.00000480772
Simmondsia chinensis GWHAASQ00000007 4 CH_sci_178 4 5 0.000114838
Solanum pennellii Spenn-ch02 4 CH_spe_400 4 8 0.000380567

Available child term results

Ontology identifier Description Number of clusters
GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 10
GO:0005784 Sec61 translocon complex 8
GO:0005785 signal recognition particle receptor complex 12
GO:0005787 signal peptidase complex 18
GO:0008250 oligosaccharyltransferase complex 6
GO:0009923 fatty acid elongase complex 6
GO:0017059 serine C-palmitoyltransferase complex 2
GO:0030176 integral component of endoplasmic reticulum membrane 6
GO:0034998 oligosaccharyltransferase I complex 2
GO:0042406 extrinsic component of endoplasmic reticulum membrane 2
GO:0042765 GPI-anchor transamidase complex 4
GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane 4
GO:0072546 EMC complex 20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001