Functional clusters

Information

  • Type Gene Ontology
  • Description ESCRT II complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00119 3 CH_atr_297 2 2 0.000476644
Camellia sinensis var. sinensis Chr12 3 CH_camsi_821 2 4 0.000825322
Capsicum annuum PGAv.1.6.scaffold134 3 CH_can_449 2 3 0.000743443
Cucumis melo chr06 3 CH_cme_243 2 2 0.000400267
Carica papaya supercontig_54 3 CH_cpa_284 2 3 0.000855527
Hydrangea macrophylla Hma1.2p1_0327F.1 3 CH_hma_72 3 3 0.000000370226
Nelumbo nucifera chr2 3 CH_nnu_267 2 2 0.00028901
Sequoiadendron giganteum chr2 3 CH_sgi_1332 2 2 0.000730727
Trochodendron aralioides group3 3 CH_tar_409 2 2 0.00036022
Vigna mungo CM024076.1 3 CH_vmu_282 2 2 0.000387685
Amborella trichopoda AmTr_v1.0_scaffold00119 4 CH_atr_297 2 2 0.000476644
Camellia sinensis var. sinensis Chr12 4 CH_camsi_821 2 4 0.000825322
Capsicum annuum PGAv.1.6.scaffold134 4 CH_can_449 2 3 0.000743443
Cucumis melo chr06 4 CH_cme_243 2 2 0.000400267
Carica papaya supercontig_54 4 CH_cpa_284 2 3 0.000855527
Hydrangea macrophylla Hma1.2p1_0327F.1 4 CH_hma_72 3 3 0.000000370226
Nelumbo nucifera chr2 4 CH_nnu_267 2 2 0.00028901
Sequoiadendron giganteum chr2 4 CH_sgi_1332 2 2 0.000730727
Trochodendron aralioides group3 4 CH_tar_409 2 2 0.00036022
Vigna mungo CM024076.1 4 CH_vmu_282 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001