Functional clusters

Information

  • Type Gene Ontology
  • Description amine metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Phaseolus vulgaris Chr05 3 CH_pvu_358 3 3 0.000665303
Phaseolus vulgaris Chr05 4 CH_pvu_358 3 3 0.000665303

Available child term results

Ontology identifier Description Number of clusters
GO:0000162 tryptophan biosynthetic process 2
GO:0006569 tryptophan catabolic process 18
GO:0006580 ethanolamine metabolic process 2
GO:0006596 polyamine biosynthetic process 6
GO:0008215 spermine metabolic process 2
GO:0009309 amine biosynthetic process 2
GO:0009447 putrescine catabolic process 8
GO:0009690 cytokinin metabolic process 10
GO:0009691 cytokinin biosynthetic process 2
GO:0009823 cytokinin catabolic process 18
GO:0030418 nicotianamine biosynthetic process 38
GO:0033387 putrescine biosynthetic process from ornithine 34
GO:0033389 putrescine biosynthetic process from arginine, using agmatinase 18
GO:0033466 trans-zeatin biosynthetic process 2
GO:0046203 spermidine catabolic process 2
GO:0090357 regulation of tryptophan metabolic process 2
GO:1901997 negative regulation of indoleacetic acid biosynthetic process via tryptophan 4
GO:2000214 regulation of proline metabolic process 12

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001