Functional clusters

Information

  • Type Gene Ontology
  • Description protein kinase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_167 14 20 0.0000000000319646
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_223 13 21 0.00000000407512
Arabidopsis thaliana Chr1 3 CH_ath_197 13 60 0.00000071602
Arabidopsis thaliana Chr4 3 CH_ath_206 6 6 0.00000112521
Amborella trichopoda AmTr_v1.0_scaffold00022 3 CH_atr_265 10 33 0.0002498
Brassica rapa A01 3 CH_bra_64 15 36 0.0000000132902
Cicer arietinum L. Ca_LG4_v3 3 CH_car_93 8 12 0.0000527138
Corylus avellana 9 3 CH_cav_73 11 12 0.000000000591775
Citrus clementina scaffold_2 3 CH_ccl_223 20 69 0.00000298505
Citrus clementina scaffold_5 3 CH_ccl_31 20 25 1.17423e-17
Cucumis melo chr01 3 CH_cme_37 12 16 0.0000000000109705
Corchorus olitorius AWUE01020869.1 3 CH_col_12 11 13 0.0000000000148401
Chenopodium quinoa C_Quinoa_Scaffold_3670 3 CH_cqu_113 10 11 0.00000000531444
Chenopodium quinoa C_Quinoa_Scaffold_2715 3 CH_cqu_14 30 46 3.15478e-26
Chenopodium quinoa C_Quinoa_Scaffold_2081 3 CH_cqu_176 12 22 0.000000361668
Chenopodium quinoa C_Quinoa_Scaffold_2947 3 CH_cqu_20 23 32 7.17543e-21
Chenopodium quinoa C_Quinoa_Scaffold_2088 3 CH_cqu_210 10 15 0.00000124928
Chenopodium quinoa C_Quinoa_Scaffold_3617 3 CH_cqu_269 16 54 0.0000105089
Chenopodium quinoa C_Quinoa_Scaffold_1862 3 CH_cqu_285 10 18 0.000016274
Chenopodium quinoa C_Quinoa_Scaffold_2088 3 CH_cqu_32 20 31 3.1059e-16
Chenopodium quinoa C_Quinoa_Scaffold_2715 3 CH_cqu_54 27 79 0.000000000000123446
Daucus carota DCARv2_Chr4 3 CH_dca_104 14 30 0.0000000485254
Daucus carota DCARv2_Chr1 3 CH_dca_267 6 6 0.00011339
Daucus carota DCARv2_Chr9 3 CH_dca_268 6 6 0.00011339
Durio zibethinus NW_019167938.1 3 CH_dzi_53 11 11 0.0000000000267042
Durio zibethinus NW_019167982.1 3 CH_dzi_60 12 14 0.0000000000928695
Durio zibethinus NW_019168015.1 3 CH_dzi_94 14 28 0.0000000435224
Fragaria x ananassa Fvb3-1 3 CH_fan_232 19 80 0.00000354777
Fragaria vesca Fvb3 3 CH_fve_43 20 44 0.000000000000160518
Gossypium hirsutum A06 3 CH_ghi_210 13 22 0.0000000492341
Helianthus annuus HanXRQChr09 3 CH_han_503 19 73 0.0000963992
Lupinus albus Lalb_Chr10 3 CH_lal_269 8 12 0.000119916
Lotus japonicus chr5 3 CH_lja_238 8 12 0.0000889311
Lonicera japonica GWHAAZE00000003 3 CH_lonja_15 30 33 1.23601e-33
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_96 18 37 0.0000000000621989
Magnolia biondii Chr04 3 CH_mbi_210 10 17 0.000000167678
Nelumbo nucifera chr5 3 CH_nnu_11 30 56 2.32732e-26
Nelumbo nucifera chr5 3 CH_nnu_205 9 20 0.000104924
Nelumbo nucifera chr8 3 CH_nnu_75 19 74 0.0000000212391
Oryza sativa ssp. japonica chr11 3 CH_osa_165 11 19 0.000000515178
Oryza sativa ssp. japonica chr09 3 CH_osa_175 14 36 0.000000843792
Oryza sativa ssp. japonica chr07 3 CH_osa_19 27 64 3.21178e-17
Prunus persica Pp03 3 CH_ppe_40 19 24 1.51716e-17
Papaver somniferum NW_020650859.1 3 CH_pso_221 14 44 0.0000000338455
Quercus lobata 4 3 CH_qlo_153 28 60 0.00000000000000527374
Quercus lobata 10 3 CH_qlo_187 21 36 0.00000000000045083
Quercus lobata 4 3 CH_qlo_249 16 23 0.0000000000581262
Quercus lobata 4 3 CH_qlo_275 20 41 0.000000000283847
Quercus lobata 5 3 CH_qlo_285 24 63 0.000000000581915
Quercus lobata 3 3 CH_qlo_362 12 15 0.0000000139504
Quercus lobata 5 3 CH_qlo_39 30 39 1.16433e-25
Quercus lobata 1 3 CH_qlo_449 12 17 0.00000017072
Quercus lobata 5 3 CH_qlo_71 29 46 1.12029e-20
Quercus lobata Scq3eQI_73 3 CH_qlo_838 10 17 0.000156158
Quercus lobata 4 3 CH_qlo_910 9 14 0.000320468
Quercus lobata CM012294 3 CH_qlo_951 7 8 0.000505448
Quercus lobata 3 3 CH_qlo_994 10 19 0.000668638
Rhododendron simsii chr07 3 CH_rsi_284 13 32 0.00000539463
Rhododendron simsii chr02 3 CH_rsi_289 9 13 0.00000690033
Rhododendron simsii chr06 3 CH_rsi_57 27 61 4.96089e-17
Sequoiadendron giganteum chr9 3 CH_sgi_336 11 11 0.0000000000172152
Solanum lycopersicum SL4.0ch05 3 CH_sly_108 12 17 0.000000000836017
Solanum lycopersicum SL4.0ch12 3 CH_sly_36 15 16 1.12995e-16
Solanum lycopersicum SL4.0ch02 3 CH_sly_43 24 56 9.61737e-16
Selaginella moellendorffii scaffold_40 3 CH_smo_178 10 31 0.000564093
Solanum tuberosum ST4.03ch02 3 CH_stu_159 12 20 0.00000000449591
Solanum tuberosum ST4.03ch04 3 CH_stu_321 9 16 0.0000130131
Solanum tuberosum ST4.03ch04 3 CH_stu_553 8 16 0.000446198
Trochodendron aralioides group14 3 CH_tar_249 11 24 0.0000356355
Theobroma cacao Chromosome_5 3 CH_tca_186 10 15 0.00000120121
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_10 30 63 5.68568e-19
Vigna mungo CM024071.1 3 CH_vmu_7 20 31 2.52916e-16
Vitis vinifera chr19 3 CH_vvi_15 30 44 1.86998e-27
Zea mays 5 3 CH_zma_117 8 8 0.000000478633
Zea mays 7 3 CH_zma_67 13 20 0.00000000414259
Zea mays 1 3 CH_zma_74 9 9 0.0000000206468
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_167 14 20 0.0000000000319646
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_223 13 21 0.00000000407512
Arabidopsis thaliana Chr1 4 CH_ath_197 13 60 0.00000071602
Arabidopsis thaliana Chr4 4 CH_ath_206 6 6 0.00000112521
Amborella trichopoda AmTr_v1.0_scaffold00022 4 CH_atr_265 10 33 0.0002498
Brassica rapa A01 4 CH_bra_64 15 36 0.0000000132902
Cicer arietinum L. Ca_LG4_v3 4 CH_car_93 8 12 0.0000527138
Corylus avellana 9 4 CH_cav_73 11 12 0.000000000591775
Citrus clementina scaffold_2 4 CH_ccl_223 20 69 0.00000298505
Citrus clementina scaffold_5 4 CH_ccl_31 20 25 1.17423e-17
Cucumis melo chr01 4 CH_cme_37 12 16 0.0000000000109705
Corchorus olitorius AWUE01020869.1 4 CH_col_12 11 13 0.0000000000148401
Chenopodium quinoa C_Quinoa_Scaffold_3670 4 CH_cqu_113 10 11 0.00000000531444
Chenopodium quinoa C_Quinoa_Scaffold_2715 4 CH_cqu_14 30 46 3.15478e-26
Chenopodium quinoa C_Quinoa_Scaffold_2081 4 CH_cqu_176 12 22 0.000000361668
Chenopodium quinoa C_Quinoa_Scaffold_2947 4 CH_cqu_20 23 32 7.17543e-21
Chenopodium quinoa C_Quinoa_Scaffold_2088 4 CH_cqu_210 10 15 0.00000124928
Chenopodium quinoa C_Quinoa_Scaffold_3617 4 CH_cqu_269 16 54 0.0000105089
Chenopodium quinoa C_Quinoa_Scaffold_1862 4 CH_cqu_285 10 18 0.000016274
Chenopodium quinoa C_Quinoa_Scaffold_2088 4 CH_cqu_32 20 31 3.1059e-16
Chenopodium quinoa C_Quinoa_Scaffold_2715 4 CH_cqu_54 27 79 0.000000000000123446
Daucus carota DCARv2_Chr4 4 CH_dca_104 14 30 0.0000000485254
Daucus carota DCARv2_Chr1 4 CH_dca_267 6 6 0.00011339
Daucus carota DCARv2_Chr9 4 CH_dca_268 6 6 0.00011339
Durio zibethinus NW_019167938.1 4 CH_dzi_53 11 11 0.0000000000267042
Durio zibethinus NW_019167982.1 4 CH_dzi_60 12 14 0.0000000000928695
Durio zibethinus NW_019168015.1 4 CH_dzi_94 14 28 0.0000000435224
Fragaria x ananassa Fvb3-1 4 CH_fan_232 19 80 0.00000354777
Fragaria vesca Fvb3 4 CH_fve_43 20 44 0.000000000000160518
Gossypium hirsutum A06 4 CH_ghi_210 13 22 0.0000000492341
Helianthus annuus HanXRQChr09 4 CH_han_503 19 73 0.0000963992
Lupinus albus Lalb_Chr10 4 CH_lal_269 8 12 0.000119916
Lotus japonicus chr5 4 CH_lja_238 8 12 0.0000889311
Lonicera japonica GWHAAZE00000003 4 CH_lonja_15 30 33 1.23601e-33
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_96 18 37 0.0000000000621989
Magnolia biondii Chr04 4 CH_mbi_210 10 17 0.000000167678
Nelumbo nucifera chr5 4 CH_nnu_11 30 56 2.32732e-26
Nelumbo nucifera chr5 4 CH_nnu_205 9 20 0.000104924
Nelumbo nucifera chr8 4 CH_nnu_75 19 74 0.0000000212391
Oryza sativa ssp. japonica chr11 4 CH_osa_165 11 19 0.000000515178
Oryza sativa ssp. japonica chr09 4 CH_osa_175 14 36 0.000000843792
Oryza sativa ssp. japonica chr07 4 CH_osa_19 27 64 3.21178e-17
Prunus persica Pp03 4 CH_ppe_40 19 24 1.51716e-17
Papaver somniferum NW_020650859.1 4 CH_pso_221 14 44 0.0000000338455
Quercus lobata 4 4 CH_qlo_153 28 60 0.00000000000000527374
Quercus lobata 10 4 CH_qlo_187 21 36 0.00000000000045083
Quercus lobata 4 4 CH_qlo_249 16 23 0.0000000000581262
Quercus lobata 4 4 CH_qlo_275 20 41 0.000000000283847
Quercus lobata 5 4 CH_qlo_285 24 63 0.000000000581915
Quercus lobata 3 4 CH_qlo_362 12 15 0.0000000139504
Quercus lobata 5 4 CH_qlo_39 30 39 1.16433e-25
Quercus lobata 1 4 CH_qlo_449 12 17 0.00000017072
Quercus lobata 5 4 CH_qlo_71 29 46 1.12029e-20
Quercus lobata Scq3eQI_73 4 CH_qlo_838 10 17 0.000156158
Quercus lobata 4 4 CH_qlo_910 9 14 0.000320468
Quercus lobata CM012294 4 CH_qlo_951 7 8 0.000505448
Quercus lobata 3 4 CH_qlo_994 10 19 0.000668638
Rhododendron simsii chr07 4 CH_rsi_284 13 32 0.00000539463
Rhododendron simsii chr02 4 CH_rsi_289 9 13 0.00000690033
Rhododendron simsii chr06 4 CH_rsi_57 27 61 4.96089e-17
Sequoiadendron giganteum chr9 4 CH_sgi_336 11 11 0.0000000000172152
Solanum lycopersicum SL4.0ch05 4 CH_sly_108 12 17 0.000000000836017
Solanum lycopersicum SL4.0ch12 4 CH_sly_36 15 16 1.12995e-16
Solanum lycopersicum SL4.0ch02 4 CH_sly_43 24 56 9.61737e-16
Selaginella moellendorffii scaffold_40 4 CH_smo_178 10 31 0.000564093
Solanum tuberosum ST4.03ch02 4 CH_stu_159 12 20 0.00000000449591
Solanum tuberosum ST4.03ch04 4 CH_stu_321 9 16 0.0000130131
Solanum tuberosum ST4.03ch04 4 CH_stu_553 8 16 0.000446198
Trochodendron aralioides group14 4 CH_tar_249 11 24 0.0000356355
Theobroma cacao Chromosome_5 4 CH_tca_186 10 15 0.00000120121
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_10 30 63 5.68568e-19
Vigna mungo CM024071.1 4 CH_vmu_7 20 31 2.52916e-16
Vitis vinifera chr19 4 CH_vvi_15 30 44 1.86998e-27
Zea mays 5 4 CH_zma_117 8 8 0.000000478633
Zea mays 7 4 CH_zma_67 13 20 0.00000000414259
Zea mays 1 4 CH_zma_74 9 9 0.0000000206468

Available child term results

Ontology identifier Description Number of clusters
GO:0000155 phosphorelay sensor kinase activity 2
GO:0004674 protein serine/threonine kinase activity 102
GO:0004675 transmembrane receptor protein serine/threonine kinase activity 24
GO:0004683 calmodulin-dependent protein kinase activity 2
GO:0004693 cyclin-dependent protein serine/threonine kinase activity 4
GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity 4
GO:0004708 MAP kinase kinase activity 4
GO:0004709 MAP kinase kinase kinase activity 30
GO:0004713 protein tyrosine kinase activity 6
GO:0004740 pyruvate dehydrogenase (acetyl-transferring) kinase activity 2
GO:0008349 MAP kinase kinase kinase kinase activity 2
GO:0009885 transmembrane histidine kinase cytokinin receptor activity 2
GO:0009927 histidine phosphotransfer kinase activity 2
GO:0009931 calcium-dependent protein serine/threonine kinase activity 2
GO:0019199 transmembrane receptor protein kinase activity 30
GO:0019912 cyclin-dependent protein kinase activating kinase activity 2
GO:0035173 histone kinase activity 2
GO:0035175 histone kinase activity (H3-S10 specific) 2
GO:0106310 protein serine kinase activity 22

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001