Functional clusters
Information
- Type Gene Ontology
- Description transmembrane receptor protein serine/threonine kinase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 3 | CH_atr_3 | 13 | 20 | 2.02153e-34 |
| Camellia sinensis var. sinensis | Chr3 | 3 | CH_camsi_262 | 4 | 9 | 0.000000141062 |
| Gossypium hirsutum | D13 | 3 | CH_ghi_174 | 4 | 5 | 0.00000000361165 |
| Gossypium raimondii | Chr13 | 3 | CH_gra_79 | 4 | 4 | 0.000000000462748 |
| Medicago truncatula | chr2 | 3 | CH_mtr_66 | 5 | 5 | 0.00000000000000538647 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_110 | 3 | 3 | 0.000000228572 |
| Populus trichocarpa | Chr06 | 3 | CH_ptr_119 | 5 | 11 | 0.000000000168659 |
| Quercus lobata | 7 | 3 | CH_qlo_152 | 9 | 69 | 0.00000000000000518834 |
| Sechium edule | LG13 | 3 | CH_sed_115 | 3 | 3 | 0.00000125974 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_426 | 3 | CH_tpr_358 | 2 | 2 | 0.000756974 |
| Tripterygium wilfordii | NC_052249.1 | 3 | CH_twi_150 | 4 | 14 | 0.00000459663 |
| Tripterygium wilfordii | NC_052239.1 | 3 | CH_twi_188 | 3 | 4 | 0.0000330575 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 4 | CH_atr_3 | 13 | 20 | 2.02153e-34 |
| Camellia sinensis var. sinensis | Chr3 | 4 | CH_camsi_262 | 4 | 9 | 0.000000141062 |
| Gossypium hirsutum | D13 | 4 | CH_ghi_174 | 4 | 5 | 0.00000000361165 |
| Gossypium raimondii | Chr13 | 4 | CH_gra_79 | 4 | 4 | 0.000000000462748 |
| Medicago truncatula | chr2 | 4 | CH_mtr_66 | 5 | 5 | 0.00000000000000538647 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_110 | 3 | 3 | 0.000000228572 |
| Populus trichocarpa | Chr06 | 4 | CH_ptr_119 | 5 | 11 | 0.000000000168659 |
| Quercus lobata | 7 | 4 | CH_qlo_152 | 9 | 69 | 0.00000000000000518834 |
| Sechium edule | LG13 | 4 | CH_sed_115 | 3 | 3 | 0.00000125974 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_426 | 4 | CH_tpr_358 | 2 | 2 | 0.000756974 |
| Tripterygium wilfordii | NC_052249.1 | 4 | CH_twi_150 | 4 | 14 | 0.00000459663 |
| Tripterygium wilfordii | NC_052239.1 | 4 | CH_twi_188 | 3 | 4 | 0.0000330575 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |