Functional clusters
Information
- Type Gene Ontology
- Description protein serine/threonine kinase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 3 | CH_aag_39 | 6 | 9 | 0.0000000194634 |
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_236 | 4 | 4 | 0.000189624 |
| Avicennia marina | ScioBoG_102840_HRSCAF_103099 | 3 | CH_ama_117 | 5 | 9 | 0.000623309 |
| Avicennia marina | ScioBoG_102840_HRSCAF_103099 | 3 | CH_ama_39 | 6 | 10 | 0.0000120377 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 3 | CH_amhyb_14 | 10 | 13 | 0.0000000000000179819 |
| Brassica carinata | Contig1162 | 3 | CH_bca_739 | 4 | 5 | 0.000273466 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_27 | 21 | 75 | 5.76544e-20 |
| Chara braunii | BFEA01000008 | 3 | CH_cbr_89 | 5 | 12 | 0.0000426306 |
| Coffea canephora | chr0 | 3 | CH_ccan_397 | 4 | 26 | 0.000847207 |
| Citrus clementina | scaffold_7 | 3 | CH_ccl_189 | 7 | 11 | 0.000000361113 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_99 | 9 | 14 | 0.000000000326798 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_291 | 5 | 5 | 0.0000129444 |
| Carya illinoinensis | Chr14 | 3 | CH_cil_439 | 5 | 7 | 0.000265909 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3107 | 3 | CH_cqu_56 | 10 | 14 | 0.000000000000253895 |
| Capsella rubella | scaffold_6 | 3 | CH_cru_253 | 4 | 4 | 0.000192397 |
| Durio zibethinus | NW_019168492.1 | 3 | CH_dzi_147 | 6 | 6 | 0.0000027715 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_626 | 7 | 14 | 0.0000218581 |
| Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_563 | 4 | 5 | 0.000975838 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_307 | 4 | 4 | 0.000194866 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_398 | 4 | 5 | 0.000967575 |
| Gossypium hirsutum | D13 | 3 | CH_ghi_501 | 4 | 4 | 0.000220148 |
| Gossypium raimondii | Chr12 | 3 | CH_gra_53 | 10 | 16 | 0.000000000000874482 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_623 | 6 | 17 | 0.000336119 |
| Lupinus albus | Lalb_Chr22 | 3 | CH_lal_307 | 5 | 5 | 0.000183454 |
| Lotus japonicus | chr3 | 3 | CH_lja_298 | 4 | 4 | 0.000325527 |
| Lonicera japonica | GWHAAZE00000009 | 3 | CH_lonja_603 | 4 | 5 | 0.000898324 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_351 | 6 | 14 | 0.0000883743 |
| Magnolia biondii | Chr18 | 3 | CH_mbi_517 | 8 | 58 | 0.000242723 |
| Malus domestica | Chr05 | 3 | CH_mdo_117 | 13 | 65 | 0.000000000774055 |
| Malus domestica | Chr11 | 3 | CH_mdo_251 | 8 | 22 | 0.000000461118 |
| Manihot esculenta | Chromosome12 | 3 | CH_mes_190 | 7 | 11 | 0.000000490097 |
| Medicago truncatula | chr8 | 3 | CH_mtr_138 | 12 | 42 | 0.0000000000233343 |
| Medicago truncatula | chr7 | 3 | CH_mtr_377 | 6 | 10 | 0.00000241696 |
| Medicago truncatula | chr4 | 3 | CH_mtr_765 | 4 | 5 | 0.000951344 |
| Olea europaea | chr7 | 3 | CH_oeu_85 | 5 | 5 | 0.000000741728 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_373 | 6 | 11 | 0.000718743 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_69 | 19 | 79 | 0.0000000000315199 |
| Prunus persica | Pp06 | 3 | CH_ppe_297 | 6 | 12 | 0.000054217 |
| Prunus persica | Pp06 | 3 | CH_ppe_78 | 15 | 54 | 0.00000000000101822 |
| Populus trichocarpa | scaffold_104 | 3 | CH_ptr_81 | 10 | 12 | 0.000000000000558308 |
| Phaseolus vulgaris | Chr01 | 3 | CH_pvu_306 | 4 | 4 | 0.000334057 |
| Quercus lobata | 5 | 3 | CH_qlo_226 | 16 | 37 | 0.0000000000112051 |
| Salix brachista | GWHAAZH00000005 | 3 | CH_sbr_181 | 5 | 5 | 0.00000447801 |
| Salix brachista | GWHAAZH00000011 | 3 | CH_sbr_19 | 14 | 26 | 5.94007e-17 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_23 | 18 | 71 | 0.00000000000000143681 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_360 | 7 | 7 | 0.0000000000446265 |
| Sapria himalayana | scaffold19_10581841 | 3 | CH_shi_1 | 18 | 36 | 6.57183e-33 |
| Solanum tuberosum | ST4.03ch07 | 3 | CH_stu_202 | 10 | 22 | 0.00000012576 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_323 | 4 | 4 | 0.000388702 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_255 | 4 | 4 | 0.000227206 |
| Vitis vinifera | chrUn | 3 | CH_vvi_290 | 5 | 8 | 0.000101059 |
| Anthoceros agrestis | Sc2ySwM_228 | 4 | CH_aag_39 | 6 | 9 | 0.0000000194634 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_236 | 4 | 4 | 0.000189624 |
| Avicennia marina | ScioBoG_102840_HRSCAF_103099 | 4 | CH_ama_117 | 5 | 9 | 0.000623309 |
| Avicennia marina | ScioBoG_102840_HRSCAF_103099 | 4 | CH_ama_39 | 6 | 10 | 0.0000120377 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 4 | CH_amhyb_14 | 10 | 13 | 0.0000000000000179819 |
| Brassica carinata | Contig1162 | 4 | CH_bca_739 | 4 | 5 | 0.000273466 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_27 | 21 | 75 | 5.76544e-20 |
| Chara braunii | BFEA01000008 | 4 | CH_cbr_89 | 5 | 12 | 0.0000426306 |
| Coffea canephora | chr0 | 4 | CH_ccan_397 | 4 | 26 | 0.000847207 |
| Citrus clementina | scaffold_7 | 4 | CH_ccl_189 | 7 | 11 | 0.000000361113 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_99 | 9 | 14 | 0.000000000326798 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_291 | 5 | 5 | 0.0000129444 |
| Carya illinoinensis | Chr14 | 4 | CH_cil_439 | 5 | 7 | 0.000265909 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3107 | 4 | CH_cqu_56 | 10 | 14 | 0.000000000000253895 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_253 | 4 | 4 | 0.000192397 |
| Durio zibethinus | NW_019168492.1 | 4 | CH_dzi_147 | 6 | 6 | 0.0000027715 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_626 | 7 | 14 | 0.0000218581 |
| Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_563 | 4 | 5 | 0.000975838 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_307 | 4 | 4 | 0.000194866 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_398 | 4 | 5 | 0.000967575 |
| Gossypium hirsutum | D13 | 4 | CH_ghi_501 | 4 | 4 | 0.000220148 |
| Gossypium raimondii | Chr12 | 4 | CH_gra_53 | 10 | 16 | 0.000000000000874482 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_623 | 6 | 17 | 0.000336119 |
| Lupinus albus | Lalb_Chr22 | 4 | CH_lal_307 | 5 | 5 | 0.000183454 |
| Lotus japonicus | chr3 | 4 | CH_lja_298 | 4 | 4 | 0.000325527 |
| Lonicera japonica | GWHAAZE00000009 | 4 | CH_lonja_603 | 4 | 5 | 0.000898324 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_351 | 6 | 14 | 0.0000883743 |
| Magnolia biondii | Chr18 | 4 | CH_mbi_517 | 8 | 58 | 0.000242723 |
| Malus domestica | Chr05 | 4 | CH_mdo_117 | 13 | 65 | 0.000000000774055 |
| Malus domestica | Chr11 | 4 | CH_mdo_251 | 8 | 22 | 0.000000461118 |
| Manihot esculenta | Chromosome12 | 4 | CH_mes_190 | 7 | 11 | 0.000000490097 |
| Medicago truncatula | chr8 | 4 | CH_mtr_138 | 12 | 42 | 0.0000000000233343 |
| Medicago truncatula | chr7 | 4 | CH_mtr_377 | 6 | 10 | 0.00000241696 |
| Medicago truncatula | chr4 | 4 | CH_mtr_765 | 4 | 5 | 0.000951344 |
| Olea europaea | chr7 | 4 | CH_oeu_85 | 5 | 5 | 0.000000741728 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_373 | 6 | 11 | 0.000718743 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_69 | 19 | 79 | 0.0000000000315199 |
| Prunus persica | Pp06 | 4 | CH_ppe_297 | 6 | 12 | 0.000054217 |
| Prunus persica | Pp06 | 4 | CH_ppe_78 | 15 | 54 | 0.00000000000101822 |
| Populus trichocarpa | scaffold_104 | 4 | CH_ptr_81 | 10 | 12 | 0.000000000000558308 |
| Phaseolus vulgaris | Chr01 | 4 | CH_pvu_306 | 4 | 4 | 0.000334057 |
| Quercus lobata | 5 | 4 | CH_qlo_226 | 16 | 37 | 0.0000000000112051 |
| Salix brachista | GWHAAZH00000005 | 4 | CH_sbr_181 | 5 | 5 | 0.00000447801 |
| Salix brachista | GWHAAZH00000011 | 4 | CH_sbr_19 | 14 | 26 | 5.94007e-17 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_23 | 18 | 71 | 0.00000000000000143681 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_360 | 7 | 7 | 0.0000000000446265 |
| Sapria himalayana | scaffold19_10581841 | 4 | CH_shi_1 | 18 | 36 | 6.57183e-33 |
| Solanum tuberosum | ST4.03ch07 | 4 | CH_stu_202 | 10 | 22 | 0.00000012576 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_323 | 4 | 4 | 0.000388702 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_255 | 4 | 4 | 0.000227206 |
| Vitis vinifera | chrUn | 4 | CH_vvi_290 | 5 | 8 | 0.000101059 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | 24 |
| GO:0004683 | calmodulin-dependent protein kinase activity | 2 |
| GO:0004693 | cyclin-dependent protein serine/threonine kinase activity | 4 |
| GO:0004694 | eukaryotic translation initiation factor 2alpha kinase activity | 4 |
| GO:0004709 | MAP kinase kinase kinase activity | 30 |
| GO:0008349 | MAP kinase kinase kinase kinase activity | 2 |
| GO:0009931 | calcium-dependent protein serine/threonine kinase activity | 2 |
| GO:0035175 | histone kinase activity (H3-S10 specific) | 2 |
| GO:0106310 | protein serine kinase activity | 22 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |