Functional clusters
Information
- Type Gene Ontology
- Description transmembrane receptor protein kinase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_102 | 6 | 6 | 0.000000000000017573 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_483 | 4 | 18 | 0.0000896759 |
| Capsicum annuum | PGAv.1.6.scaffold1014 | 3 | CH_can_226 | 3 | 3 | 0.00000465791 |
| Coffea canephora | chr5 | 3 | CH_ccan_134 | 4 | 81 | 0.00000291976 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_76 | 3 | 3 | 0.00000906696 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_207 | 4 | 6 | 0.000000187855 |
| Medicago truncatula | chr5 | 3 | CH_mtr_23 | 12 | 39 | 6.37301e-25 |
| Pisum sativum | chr2LG1 | 3 | CH_psa_207 | 3 | 4 | 0.000037534 |
| Quercus lobata | 5 | 3 | CH_qlo_190 | 6 | 7 | 0.000000000000619951 |
| Quercus lobata | 8 | 3 | CH_qlo_259 | 5 | 5 | 0.0000000000817538 |
| Simmondsia chinensis | GWHAASQ00000012 | 3 | CH_sci_98 | 3 | 3 | 0.00000395827 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_1187 | 3 | 4 | 0.000246075 |
| Theobroma cacao | Chromosome_1 | 3 | CH_tca_249 | 3 | 4 | 0.0000427827 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_182 | 3 | 3 | 0.0000314078 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_206 | 5 | 62 | 0.0000915619 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_102 | 6 | 6 | 0.000000000000017573 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_483 | 4 | 18 | 0.0000896759 |
| Capsicum annuum | PGAv.1.6.scaffold1014 | 4 | CH_can_226 | 3 | 3 | 0.00000465791 |
| Coffea canephora | chr5 | 4 | CH_ccan_134 | 4 | 81 | 0.00000291976 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_76 | 3 | 3 | 0.00000906696 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_207 | 4 | 6 | 0.000000187855 |
| Medicago truncatula | chr5 | 4 | CH_mtr_23 | 12 | 39 | 6.37301e-25 |
| Pisum sativum | chr2LG1 | 4 | CH_psa_207 | 3 | 4 | 0.000037534 |
| Quercus lobata | 5 | 4 | CH_qlo_190 | 6 | 7 | 0.000000000000619951 |
| Quercus lobata | 8 | 4 | CH_qlo_259 | 5 | 5 | 0.0000000000817538 |
| Simmondsia chinensis | GWHAASQ00000012 | 4 | CH_sci_98 | 3 | 3 | 0.00000395827 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_1187 | 3 | 4 | 0.000246075 |
| Theobroma cacao | Chromosome_1 | 4 | CH_tca_249 | 3 | 4 | 0.0000427827 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_182 | 3 | 3 | 0.0000314078 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_206 | 5 | 62 | 0.0000915619 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | 24 |
| GO:0009885 | transmembrane histidine kinase cytokinin receptor activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |