Functional clusters
Information
- Type Gene Ontology
- Description MAP kinase kinase kinase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold370 | 3 | CH_can_394 | 3 | 3 | 0.0003328 |
| Capsicum annuum | PGAv.1.6.scaffold198 | 3 | CH_can_96 | 6 | 9 | 0.000000000325899 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_693 | 3 | 5 | 0.000619937 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_352 | 3 | 3 | 0.0000983018 |
| Nelumbo nucifera | chr3 | 3 | CH_nnu_78 | 5 | 10 | 0.0000000320196 |
| Olea europaea | chr7 | 3 | CH_oeu_83 | 4 | 5 | 0.00000072076 |
| Quercus lobata | 5 | 3 | CH_qlo_922 | 3 | 4 | 0.000374295 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_401 | 3 | 4 | 0.000214658 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_206 | 6 | 6 | 0.0000000000000100223 |
| Solanum lycopersicum | SL4.0ch07 | 3 | CH_sly_161 | 5 | 8 | 0.000000127012 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_515 | 3 | 3 | 0.000440903 |
| Solanum pennellii | Spenn-ch07 | 3 | CH_spe_113 | 5 | 7 | 0.0000000121484 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_367 | 3 | 3 | 0.000217083 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_486 | 3 | 3 | 0.000172065 |
| Zea mays | 3 | 3 | CH_zma_278 | 3 | 4 | 0.000388706 |
| Capsicum annuum | PGAv.1.6.scaffold370 | 4 | CH_can_394 | 3 | 3 | 0.0003328 |
| Capsicum annuum | PGAv.1.6.scaffold198 | 4 | CH_can_96 | 6 | 9 | 0.000000000325899 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_693 | 3 | 5 | 0.000619937 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_352 | 3 | 3 | 0.0000983018 |
| Nelumbo nucifera | chr3 | 4 | CH_nnu_78 | 5 | 10 | 0.0000000320196 |
| Olea europaea | chr7 | 4 | CH_oeu_83 | 4 | 5 | 0.00000072076 |
| Quercus lobata | 5 | 4 | CH_qlo_922 | 3 | 4 | 0.000374295 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_401 | 3 | 4 | 0.000214658 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_206 | 6 | 6 | 0.0000000000000100223 |
| Solanum lycopersicum | SL4.0ch07 | 4 | CH_sly_161 | 5 | 8 | 0.000000127012 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_515 | 3 | 3 | 0.000440903 |
| Solanum pennellii | Spenn-ch07 | 4 | CH_spe_113 | 5 | 7 | 0.0000000121484 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_367 | 3 | 3 | 0.000217083 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_486 | 3 | 3 | 0.000172065 |
| Zea mays | 3 | 4 | CH_zma_278 | 3 | 4 | 0.000388706 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |