Functional clusters
Information
- Type Gene Ontology
- Description double-stranded DNA binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-8 | 3 | CH_aar_177 | 4 | 4 | 0.000127663 |
| Aethionema arabicum | LG-1 | 3 | CH_aar_94 | 5 | 5 | 0.00000110079 |
| Acer truncatum | chr5 | 3 | CH_acertr_63 | 7 | 8 | 0.000000000392512 |
| Actinidia chinensis | Lachesis_group19 | 3 | CH_ach_30 | 6 | 7 | 0.0000000108996 |
| Actinidia chinensis | Lachesis_group10 | 3 | CH_ach_91 | 6 | 15 | 0.00000748637 |
| Arabidopsis lyrata | scaffold_2 | 3 | CH_aly_6 | 16 | 31 | 3.80925e-22 |
| Aquilegia oxysepala | CHR02 | 3 | CH_aox_125 | 5 | 6 | 0.00000691416 |
| Aquilegia oxysepala | CHR05 | 3 | CH_aox_169 | 5 | 8 | 0.0000636203 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 3 | CH_atr_178 | 4 | 4 | 0.0000505188 |
| Brassica carinata | ChrC04 | 3 | CH_bca_423 | 5 | 7 | 0.0000106249 |
| Brassica carinata | ChrB07 | 3 | CH_bca_424 | 5 | 7 | 0.0000106249 |
| Brassica carinata | ChrB04 | 3 | CH_bca_600 | 4 | 4 | 0.0000917048 |
| Brassica napus | A09 | 3 | CH_bna_285 | 5 | 6 | 0.00000368123 |
| Brassica napus | C09 | 3 | CH_bna_342 | 5 | 7 | 0.0000128239 |
| Brassica napus | A01 | 3 | CH_bna_617 | 4 | 5 | 0.000545531 |
| Brassica napus | C01 | 3 | CH_bna_92 | 7 | 8 | 0.000000000154468 |
| Brassica oleracea | C1 | 3 | CH_bol_173 | 5 | 6 | 0.00000159338 |
| Brassica rapa | A01 | 3 | CH_bra_264 | 4 | 5 | 0.000457251 |
| Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_282 | 5 | 5 | 0.000000275303 |
| Camellia sinensis var. sinensis | Chr9 | 3 | CH_camsi_53 | 12 | 30 | 0.00000000000000383407 |
| Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_20 | 6 | 7 | 0.0000000207754 |
| Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_45 | 5 | 5 | 0.000000433378 |
| Corylus avellana | 1 | 3 | CH_cav_299 | 4 | 5 | 0.000176918 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_198 | 4 | 4 | 0.000030146 |
| Cardamine hirsuta | Chr2 | 3 | CH_chi_11 | 18 | 38 | 6.3464e-24 |
| Carya illinoinensis | Chr12 | 3 | CH_cil_7 | 19 | 29 | 2.17915e-29 |
| Cucumis melo | chr10 | 3 | CH_cme_52 | 12 | 71 | 0.000000000926612 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 3 | CH_cqu_39 | 12 | 23 | 0.00000000000000180376 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2858 | 3 | CH_cqu_52 | 12 | 30 | 0.00000000000010997 |
| Capsella rubella | scaffold_2 | 3 | CH_cru_48 | 10 | 21 | 0.0000000000153609 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_18 | 18 | 72 | 1.42506e-17 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_41 | 10 | 18 | 0.00000000000143267 |
| Daucus carota | DCARv2_Chr1 | 3 | CH_dca_218 | 4 | 4 | 0.0000383972 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_304 | 7 | 8 | 0.00000000018072 |
| Eucalyptus grandis | Chr07 | 3 | CH_egr_710 | 4 | 4 | 0.0000744997 |
| Erythranthe guttata | scaffold_3 | 3 | CH_egut_107 | 8 | 14 | 0.00000000126889 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_308 | 4 | 4 | 0.000114084 |
| Eutrema salsugineum | scaffold_8 | 3 | CH_esa_2 | 18 | 26 | 4.63197e-27 |
| Fragaria vesca | Fvb6 | 3 | CH_fve_198 | 7 | 27 | 0.00000938642 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_375 | 4 | 6 | 0.000759475 |
| Gossypium hirsutum | A01 | 3 | CH_ghi_122 | 7 | 7 | 0.0000000000501334 |
| Gossypium hirsutum | D01 | 3 | CH_ghi_53 | 10 | 10 | 1.52777e-17 |
| Glycine max | Gm18 | 3 | CH_gma_214 | 6 | 10 | 0.000001655 |
| Glycine max | Gm15 | 3 | CH_gma_235 | 5 | 6 | 0.00000662924 |
| Glycine max | Gm08 | 3 | CH_gma_530 | 5 | 12 | 0.000843654 |
| Gossypium raimondii | Chr02 | 3 | CH_gra_68 | 7 | 7 | 0.0000000000408698 |
| Hydrangea macrophylla | Hma1.2p1_0399F.1 | 3 | CH_hma_117 | 4 | 4 | 0.0000264836 |
| Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_143 | 7 | 8 | 0.0000000000458918 |
| Lonicera japonica | GWHAAZE00000003 | 3 | CH_lonja_167 | 6 | 6 | 0.00000000104606 |
| Magnolia biondii | Chr19 | 3 | CH_mbi_48 | 8 | 8 | 0.00000000000000513054 |
| Magnolia biondii | Chr15 | 3 | CH_mbi_67 | 8 | 12 | 0.00000000000250143 |
| Malus domestica | Chr07 | 3 | CH_mdo_100 | 7 | 8 | 0.000000000104078 |
| Malus domestica | Chr14 | 3 | CH_mdo_435 | 4 | 4 | 0.0000650083 |
| Malus domestica | Chr02 | 3 | CH_mdo_54 | 11 | 25 | 0.0000000000000609592 |
| Manihot esculenta | Chromosome01 | 3 | CH_mes_225 | 5 | 6 | 0.00000569606 |
| Manihot esculenta | Chromosome17 | 3 | CH_mes_300 | 4 | 4 | 0.000123202 |
| Manihot esculenta | Chromosome11 | 3 | CH_mes_99 | 8 | 10 | 0.0000000000193265 |
| Medicago truncatula | chr2 | 3 | CH_mtr_14 | 22 | 69 | 3.95698e-28 |
| Medicago truncatula | chr4 | 3 | CH_mtr_634 | 4 | 5 | 0.000248604 |
| Nelumbo nucifera | chr7 | 3 | CH_nnu_202 | 7 | 45 | 0.0000758455 |
| Nelumbo nucifera | chr5 | 3 | CH_nnu_307 | 4 | 7 | 0.000691968 |
| Petunia axillaris | Peaxi162Scf00756 | 3 | CH_pax_127 | 5 | 6 | 0.0000019276 |
| Petunia axillaris | Peaxi162Scf00154 | 3 | CH_pax_79 | 6 | 9 | 0.000000169959 |
| Prunus persica | Pp02 | 3 | CH_ppe_354 | 5 | 10 | 0.000140381 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_67 | 6 | 7 | 0.0000000104793 |
| Papaver somniferum | NC_039368.1 | 3 | CH_pso_78 | 10 | 21 | 0.000000000000165936 |
| Papaver somniferum | NC_039366.1 | 3 | CH_pso_87 | 11 | 33 | 0.000000000000405 |
| Populus trichocarpa | Chr04 | 3 | CH_ptr_301 | 5 | 8 | 0.0000500925 |
| Populus trichocarpa | Chr01 | 3 | CH_ptr_56 | 9 | 9 | 0.00000000000000293059 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_209 | 7 | 13 | 0.00000000441064 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_464 | 4 | 4 | 0.0000256244 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_55 | 16 | 68 | 2.67532e-18 |
| Rhododendron simsii | chr10 | 3 | CH_rsi_105 | 9 | 18 | 0.0000000000201947 |
| Striga asiatica | scaffold1 | 3 | CH_sas_3 | 11 | 18 | 4.48682e-16 |
| Salvia bowleyana | GWHASIU00000006 | 3 | CH_sbo_339 | 6 | 26 | 0.0000642534 |
| Salvia bowleyana | GWHASIU00000001 | 3 | CH_sbo_461 | 4 | 7 | 0.000559932 |
| Salvia bowleyana | GWHASIU00000006 | 3 | CH_sbo_78 | 8 | 11 | 0.000000000000892061 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_92 | 9 | 21 | 0.00000000000649742 |
| Salix brachista | GWHAAZH00000001 | 3 | CH_sbr_140 | 5 | 5 | 0.000000250505 |
| Salix brachista | GWHAAZH00000003 | 3 | CH_sbr_167 | 5 | 6 | 0.00000149556 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_74 | 6 | 6 | 0.00000000148401 |
| Sechium edule | LG02 | 3 | CH_sed_47 | 7 | 7 | 0.0000000000601561 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_126 | 13 | 22 | 8.3206e-20 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_204 | 10 | 16 | 0.00000000000000871307 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_919 | 4 | 4 | 0.0000407941 |
| Schrenkiella parvula | ch2-2 | 3 | CH_spa_16 | 7 | 7 | 0.0000000000765266 |
| Solanum pennellii | Spenn-ch04 | 3 | CH_spe_46 | 7 | 7 | 0.00000000000171879 |
| Trochodendron aralioides | group1 | 3 | CH_tar_33 | 8 | 8 | 0.000000000000648653 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_26 | 10 | 12 | 4.61031e-16 |
| Tarenaya hassleriana | NW_010966177.1 | 3 | CH_tha_122 | 4 | 4 | 0.000190207 |
| Tarenaya hassleriana | NW_010966881.1 | 3 | CH_tha_79 | 5 | 6 | 0.0000101281 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 3 | CH_tpr_199 | 4 | 4 | 0.0000614771 |
| Tripterygium wilfordii | NC_052248.1 | 3 | CH_twi_49 | 7 | 7 | 0.0000000000852816 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_255 | 4 | 4 | 0.0000973411 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_320 | 8 | 55 | 0.000350754 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_44 | 8 | 10 | 0.0000000000178327 |
| Vigna mungo | CM024072.1 | 3 | CH_vmu_30 | 7 | 7 | 0.000000000011761 |
| Vitis vinifera | chr7 | 3 | CH_vvi_349 | 4 | 5 | 0.000271565 |
| Aethionema arabicum | LG-8 | 4 | CH_aar_177 | 4 | 4 | 0.000127663 |
| Aethionema arabicum | LG-1 | 4 | CH_aar_94 | 5 | 5 | 0.00000110079 |
| Acer truncatum | chr5 | 4 | CH_acertr_63 | 7 | 8 | 0.000000000392512 |
| Actinidia chinensis | Lachesis_group19 | 4 | CH_ach_30 | 6 | 7 | 0.0000000108996 |
| Actinidia chinensis | Lachesis_group10 | 4 | CH_ach_91 | 6 | 15 | 0.00000748637 |
| Arabidopsis lyrata | scaffold_2 | 4 | CH_aly_6 | 16 | 31 | 3.80925e-22 |
| Aquilegia oxysepala | CHR02 | 4 | CH_aox_125 | 5 | 6 | 0.00000691416 |
| Aquilegia oxysepala | CHR05 | 4 | CH_aox_169 | 5 | 8 | 0.0000636203 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 4 | CH_atr_178 | 4 | 4 | 0.0000505188 |
| Brassica carinata | ChrC04 | 4 | CH_bca_423 | 5 | 7 | 0.0000106249 |
| Brassica carinata | ChrB07 | 4 | CH_bca_424 | 5 | 7 | 0.0000106249 |
| Brassica carinata | ChrB04 | 4 | CH_bca_600 | 4 | 4 | 0.0000917048 |
| Brassica napus | A09 | 4 | CH_bna_285 | 5 | 6 | 0.00000368123 |
| Brassica napus | C09 | 4 | CH_bna_342 | 5 | 7 | 0.0000128239 |
| Brassica napus | A01 | 4 | CH_bna_617 | 4 | 5 | 0.000545531 |
| Brassica napus | C01 | 4 | CH_bna_92 | 7 | 8 | 0.000000000154468 |
| Brassica oleracea | C1 | 4 | CH_bol_173 | 5 | 6 | 0.00000159338 |
| Brassica rapa | A01 | 4 | CH_bra_264 | 4 | 5 | 0.000457251 |
| Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_282 | 5 | 5 | 0.000000275303 |
| Camellia sinensis var. sinensis | Chr9 | 4 | CH_camsi_53 | 12 | 30 | 0.00000000000000383407 |
| Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_20 | 6 | 7 | 0.0000000207754 |
| Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_45 | 5 | 5 | 0.000000433378 |
| Corylus avellana | 1 | 4 | CH_cav_299 | 4 | 5 | 0.000176918 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_198 | 4 | 4 | 0.000030146 |
| Cardamine hirsuta | Chr2 | 4 | CH_chi_11 | 18 | 38 | 6.3464e-24 |
| Carya illinoinensis | Chr12 | 4 | CH_cil_7 | 19 | 29 | 2.17915e-29 |
| Cucumis melo | chr10 | 4 | CH_cme_52 | 12 | 71 | 0.000000000926612 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 4 | CH_cqu_39 | 12 | 23 | 0.00000000000000180376 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2858 | 4 | CH_cqu_52 | 12 | 30 | 0.00000000000010997 |
| Capsella rubella | scaffold_2 | 4 | CH_cru_48 | 10 | 21 | 0.0000000000153609 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_18 | 18 | 72 | 1.42506e-17 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_41 | 10 | 18 | 0.00000000000143267 |
| Daucus carota | DCARv2_Chr1 | 4 | CH_dca_218 | 4 | 4 | 0.0000383972 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_304 | 7 | 8 | 0.00000000018072 |
| Eucalyptus grandis | Chr07 | 4 | CH_egr_710 | 4 | 4 | 0.0000744997 |
| Erythranthe guttata | scaffold_3 | 4 | CH_egut_107 | 8 | 14 | 0.00000000126889 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_308 | 4 | 4 | 0.000114084 |
| Eutrema salsugineum | scaffold_8 | 4 | CH_esa_2 | 18 | 26 | 4.63197e-27 |
| Fragaria vesca | Fvb6 | 4 | CH_fve_198 | 7 | 27 | 0.00000938642 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_375 | 4 | 6 | 0.000759475 |
| Gossypium hirsutum | A01 | 4 | CH_ghi_122 | 7 | 7 | 0.0000000000501334 |
| Gossypium hirsutum | D01 | 4 | CH_ghi_53 | 10 | 10 | 1.52777e-17 |
| Glycine max | Gm18 | 4 | CH_gma_214 | 6 | 10 | 0.000001655 |
| Glycine max | Gm15 | 4 | CH_gma_235 | 5 | 6 | 0.00000662924 |
| Glycine max | Gm08 | 4 | CH_gma_530 | 5 | 12 | 0.000843654 |
| Gossypium raimondii | Chr02 | 4 | CH_gra_68 | 7 | 7 | 0.0000000000408698 |
| Hydrangea macrophylla | Hma1.2p1_0399F.1 | 4 | CH_hma_117 | 4 | 4 | 0.0000264836 |
| Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_143 | 7 | 8 | 0.0000000000458918 |
| Lonicera japonica | GWHAAZE00000003 | 4 | CH_lonja_167 | 6 | 6 | 0.00000000104606 |
| Magnolia biondii | Chr19 | 4 | CH_mbi_48 | 8 | 8 | 0.00000000000000513054 |
| Magnolia biondii | Chr15 | 4 | CH_mbi_67 | 8 | 12 | 0.00000000000250143 |
| Malus domestica | Chr07 | 4 | CH_mdo_100 | 7 | 8 | 0.000000000104078 |
| Malus domestica | Chr14 | 4 | CH_mdo_435 | 4 | 4 | 0.0000650083 |
| Malus domestica | Chr02 | 4 | CH_mdo_54 | 11 | 25 | 0.0000000000000609592 |
| Manihot esculenta | Chromosome01 | 4 | CH_mes_225 | 5 | 6 | 0.00000569606 |
| Manihot esculenta | Chromosome17 | 4 | CH_mes_300 | 4 | 4 | 0.000123202 |
| Manihot esculenta | Chromosome11 | 4 | CH_mes_99 | 8 | 10 | 0.0000000000193265 |
| Medicago truncatula | chr2 | 4 | CH_mtr_14 | 22 | 69 | 3.95698e-28 |
| Medicago truncatula | chr4 | 4 | CH_mtr_634 | 4 | 5 | 0.000248604 |
| Nelumbo nucifera | chr7 | 4 | CH_nnu_202 | 7 | 45 | 0.0000758455 |
| Nelumbo nucifera | chr5 | 4 | CH_nnu_307 | 4 | 7 | 0.000691968 |
| Petunia axillaris | Peaxi162Scf00756 | 4 | CH_pax_127 | 5 | 6 | 0.0000019276 |
| Petunia axillaris | Peaxi162Scf00154 | 4 | CH_pax_79 | 6 | 9 | 0.000000169959 |
| Prunus persica | Pp02 | 4 | CH_ppe_354 | 5 | 10 | 0.000140381 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_67 | 6 | 7 | 0.0000000104793 |
| Papaver somniferum | NC_039368.1 | 4 | CH_pso_78 | 10 | 21 | 0.000000000000165936 |
| Papaver somniferum | NC_039366.1 | 4 | CH_pso_87 | 11 | 33 | 0.000000000000405 |
| Populus trichocarpa | Chr04 | 4 | CH_ptr_301 | 5 | 8 | 0.0000500925 |
| Populus trichocarpa | Chr01 | 4 | CH_ptr_56 | 9 | 9 | 0.00000000000000293059 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_209 | 7 | 13 | 0.00000000441064 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_464 | 4 | 4 | 0.0000256244 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_55 | 16 | 68 | 2.67532e-18 |
| Rhododendron simsii | chr10 | 4 | CH_rsi_105 | 9 | 18 | 0.0000000000201947 |
| Striga asiatica | scaffold1 | 4 | CH_sas_3 | 11 | 18 | 4.48682e-16 |
| Salvia bowleyana | GWHASIU00000006 | 4 | CH_sbo_339 | 6 | 26 | 0.0000642534 |
| Salvia bowleyana | GWHASIU00000001 | 4 | CH_sbo_461 | 4 | 7 | 0.000559932 |
| Salvia bowleyana | GWHASIU00000006 | 4 | CH_sbo_78 | 8 | 11 | 0.000000000000892061 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_92 | 9 | 21 | 0.00000000000649742 |
| Salix brachista | GWHAAZH00000001 | 4 | CH_sbr_140 | 5 | 5 | 0.000000250505 |
| Salix brachista | GWHAAZH00000003 | 4 | CH_sbr_167 | 5 | 6 | 0.00000149556 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_74 | 6 | 6 | 0.00000000148401 |
| Sechium edule | LG02 | 4 | CH_sed_47 | 7 | 7 | 0.0000000000601561 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_126 | 13 | 22 | 8.3206e-20 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_204 | 10 | 16 | 0.00000000000000871307 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_919 | 4 | 4 | 0.0000407941 |
| Schrenkiella parvula | ch2-2 | 4 | CH_spa_16 | 7 | 7 | 0.0000000000765266 |
| Solanum pennellii | Spenn-ch04 | 4 | CH_spe_46 | 7 | 7 | 0.00000000000171879 |
| Trochodendron aralioides | group1 | 4 | CH_tar_33 | 8 | 8 | 0.000000000000648653 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_26 | 10 | 12 | 4.61031e-16 |
| Tarenaya hassleriana | NW_010966177.1 | 4 | CH_tha_122 | 4 | 4 | 0.000190207 |
| Tarenaya hassleriana | NW_010966881.1 | 4 | CH_tha_79 | 5 | 6 | 0.0000101281 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 4 | CH_tpr_199 | 4 | 4 | 0.0000614771 |
| Tripterygium wilfordii | NC_052248.1 | 4 | CH_twi_49 | 7 | 7 | 0.0000000000852816 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_255 | 4 | 4 | 0.0000973411 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_320 | 8 | 55 | 0.000350754 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_44 | 8 | 10 | 0.0000000000178327 |
| Vigna mungo | CM024072.1 | 4 | CH_vmu_30 | 7 | 7 | 0.000000000011761 |
| Vitis vinifera | chr7 | 4 | CH_vvi_349 | 4 | 5 | 0.000271565 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0000976 | transcription cis-regulatory region binding | 6 |
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 44 |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 12 |
| GO:0000987 | cis-regulatory region sequence-specific DNA binding | 20 |
| GO:0001164 | RNA polymerase I core promoter sequence-specific DNA binding | 4 |
| GO:0003688 | DNA replication origin binding | 4 |
| GO:0003691 | double-stranded telomeric DNA binding | 14 |
| GO:0010385 | double-stranded methylated DNA binding | 2 |
| GO:0019237 | centromeric DNA binding | 8 |
| GO:0030983 | mismatched DNA binding | 46 |
| GO:0032142 | single guanine insertion binding | 2 |
| GO:0032422 | purine-rich negative regulatory element binding | 12 |
| GO:0070888 | E-box binding | 38 |
| GO:0080084 | 5S rDNA binding | 8 |
| GO:0097100 | supercoiled DNA binding | 8 |
| GO:1990837 | sequence-specific double-stranded DNA binding | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |